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WormBase Tree Display for CDS: OVOC427b

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Name Class

OVOC427bEvidenceCurator_confirmedWBPerson4055
SMapS_parentSequenceOVOC_OM1b_7
StructureSource_exons1159
11331396
16781761
24722664
28993051
32313308
43294520
48064920
64656477
DB_infoDB_remarkOVO-UNC-75 protein; contains similarity to Pfam domain PF00076 (RNA recognition motif); contains similarity to Interpro domains IPR035979 (RNA-binding domain superfamily), IPR012677 (Nucleotide-binding alpha-beta plait domain superfamily), IPR000504 (RNA recognition motif domain)
OriginFrom_laboratoryHX
SpeciesOnchocerca volvulus
PropertiesCodingCDS
Prediction_statusConfirmed
IsoformCurator_confirmedWBPerson4055
Feature_evidenceWBsf925493
VisibleGeneWBGene00237236
Corresponding_transcriptOVOC427b.1
Corresponding_proteinOVP14732
RNASeq_FPKMWBls:0000104 (15)
WBls:000010710.6689From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:000010813.9005From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
14.1657From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
18.1767From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
WBls:000066415.1144From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
38.7699From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
Remark[150213 mh6] Created this isoform based on the RNASeq splice data and the SL1 site.Curator_confirmedWBPerson4055
Feature_evidenceWBsf925493
From_analysisRNASeq
Methodcurated