WormBase Tree Display for CDS: OVOC5117
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| OVOC5117 | SMap | S_parent | Sequence | OVOC_OM2_53 | ||
|---|---|---|---|---|---|---|
| Structure | Source_exons (33) | |||||
| DB_info | DB_remark | OVO-UNC-36 protein; contains similarity to Pfam domains PF08399 (VWA N-terminal), PF13519 (von Willebrand factor type A domain), PF13768 (von Willebrand factor type A domain); contains similarity to Interpro domains IPR036465 (von Willebrand factor A-like domain superfamily), IPR013608 (VWA N-terminal), IPR002035 (von Willebrand factor, type A) | ||||
| Origin | From_laboratory | MGM | ||||
| Species | Onchocerca volvulus | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Partially_confirmed | |||||
| Visible | Gene | WBGene00241926 | ||||
| Corresponding_transcript | OVOC5117.1 | |||||
| Corresponding_protein | OVP11351 | |||||
| Brief_identification | Voltage-dependent calcium channel homolog | Person_evidence | WBPerson2973 | |||
| RNASeq_FPKM | WBls:0000104 (15) | |||||
| WBls:0000107 | 11.2942 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395 | |||
| WBls:0000108 | 10.0699 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391 | |||
| 25.763 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392 | ||||
| 29.7661 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393 | ||||
| WBls:0000664 | 14.0648 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397 | |||
| 21.0013 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396 | ||||
| Method | curated |
