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WormBase Tree Display for CDS: OVOC6256

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Name Class

OVOC6256EvidenceCurator_confirmedWBPerson2062
SMapS_parentSequenceOVOC_OM2_97
StructureSource_exons184
26222730
30843180
35323673
72407412
80358133
82138324
DB_infoDB_remarkOVO-UNC-42 protein; contains similarity to Pfam domain PF00046 (Homeodomain); contains similarity to Interpro domains IPR001356 (Homeobox domain), IPR009057 (Homeobox-like domain superfamily)
OriginFrom_laboratoryMBM
SpeciesOnchocerca volvulus
PropertiesCodingCDS
Prediction_statusPartially_confirmed
VisibleGeneWBGene00243065
Corresponding_transcriptOVOC6256.1
Corresponding_proteinOVP13432
RNASeq_FPKMWBls:00001040.58827From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978156
0From_analysis (11)
1.03179From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450842
12.1119From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978164
6.53512From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978163
WBls:00001072.58343From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:00001082.94458From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
3.66029From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
4.76825From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
WBls:000066414.2725From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
9.85835From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
Remark[140321 es9] Merged OVOC6256 and OVOC6257 based on RNA-Seq, SL1 and protein evidence data.Curator_confirmedWBPerson2062
Methodcurated