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WormBase Tree Display for CDS: OVOC6419

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Name Class

OVOC6419SMapS_parentSequenceOVOC_OM2_101
StructureSource_exons1181
346517
9291120
13791626
19792185
23852613
29022954
39914211
DB_infoDB_remarkcontains similarity to Pfam domain PF01490 (Transmembrane amino acid transporter protein); contains similarity to Interpro domain IPR013057 (Amino acid transporter, transmembrane domain)
OriginFrom_laboratoryMGM
SpeciesOnchocerca volvulus
PropertiesCodingCDS
Prediction_statusPartially_confirmed
VisibleGeneWBGene00243228
Corresponding_transcriptOVOC6419.1
Corresponding_proteinOVP06920
Matching_cDNAovolvulus_GG1261|c46_g1_i6Inferred_automaticallytranscript_builder.pl
RNASeq_FPKMWBls:0000104 (15)
WBls:000010766.2626From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:0000108134.975From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
179.043From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
54.8919From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
WBls:0000664144.317From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
47.9895From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
Methodcurated