WormBase Tree Display for CDS: OVOC6992
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OVOC6992 | Evidence | Curator_confirmed | WBPerson2062 | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | OVOC_OM2_127 | |||
Structure | Source_exons | 1 | 121 | |||
372 | 513 | |||||
4941 | 5075 | |||||
5307 | 5384 | |||||
5868 | 5955 | |||||
13629 | 13842 | |||||
16513 | 16634 | |||||
16973 | 17086 | |||||
17500 | 17673 | |||||
18177 | 18293 | |||||
DB_info | DB_remark | contains similarity to Pfam domains PF00887 (Acyl CoA binding protein), PF13897 (Golgi-dynamics membrane-trafficking); contains similarity to Interpro domains IPR035984 (Acyl-CoA binding protein superfamily), IPR036598 (GOLD domain superfamily), IPR014352 (FERM/acyl-CoA-binding protein superfamily), IPR009038 (GOLD domain), IPR000582 (Acyl-CoA-binding protein, ACBP) | ||||
Origin | From_laboratory | MBM | ||||
Species | Onchocerca volvulus | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00243801 | ||||
Corresponding_transcript | OVOC6992.1 | |||||
Corresponding_protein | OVP13041 | |||||
Brief_identification | Golgi resident protein GCP60 homolog | Person_evidence | WBPerson2973 | |||
RNASeq_FPKM | WBls:0000104 (15) | |||||
WBls:0000107 | 13.145 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395 | |||
WBls:0000108 | 12.619 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391 | |||
27.6428 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392 | ||||
30.6423 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393 | ||||
WBls:0000664 | 24.3076 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397 | |||
27.9101 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396 | ||||
Remark | [140224 es9] Merged OVOC6988, OVOC6989, OVOC6991 and OVOC6992 based on RNA-Seq and Compara evidence. | Curator_confirmed | WBPerson2062 | |||
Method | curated |