WormBase Tree Display for CDS: OVOC7133
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| OVOC7133 | SMap | S_parent | Sequence | OVOC_OM2_133 | ||
|---|---|---|---|---|---|---|
| Structure | Source_exons (18) | |||||
| DB_info | DB_remark | OVO-UNC-112 protein; contains similarity to Pfam domains PF00169 (PH domain), PF00373 (FERM central domain), PF18124 (Kindlin-2 N-terminal domain); contains similarity to Interpro domains IPR040790 (Kindlin-2, N-terminal), IPR019748 (FERM central domain), IPR001849 (Pleckstrin homology domain), IPR037843 (Kindlin/fermitin), IPR011993 (PH-like domain superfamily), IPR035963 (FERM superfamily, second domain), IPR019749 (Band 4.1 domain) | ||||
| Origin | From_laboratory | MGM | ||||
| Species | Onchocerca volvulus | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00243942 | ||||
| Corresponding_transcript | OVOC7133.1 | |||||
| Corresponding_protein | OVP05826 | |||||
| RNASeq_FPKM | WBls:0000104 (15) | |||||
| WBls:0000107 | 34.6532 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395 | |||
| WBls:0000108 | 15.6543 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391 | |||
| 37.5606 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392 | ||||
| 42.9449 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393 | ||||
| WBls:0000664 | 38.3445 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397 | |||
| 46.1176 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396 | ||||
| Method | curated |
