WormBase Tree Display for CDS: OVOC7579
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OVOC7579 | SMap | S_parent | Sequence | OVOC_OM3_23 | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 96 | |||
252 | 372 | |||||
740 | 978 | |||||
1124 | 1247 | |||||
1465 | 1640 | |||||
2043 | 2199 | |||||
2333 | 2460 | |||||
2617 | 2844 | |||||
2964 | 3106 | |||||
3405 | 3527 | |||||
3754 | 3877 | |||||
4213 | 4412 | |||||
4785 | 5008 | |||||
5543 | 5739 | |||||
6034 | 6164 | |||||
6274 | 6378 | |||||
8162 | 8294 | |||||
8683 | 8842 | |||||
9889 | 9974 | |||||
10649 | 10772 | |||||
10987 | 11226 | |||||
11312 | 11469 | |||||
11650 | 11779 | |||||
11942 | 12045 | |||||
12357 | 12528 | |||||
12830 | 12970 | |||||
13188 | 13391 | |||||
15111 | 15216 | |||||
15916 | 15977 | |||||
16974 | 17206 | |||||
17557 | 17769 | |||||
18109 | 18276 | |||||
18667 | 18886 | |||||
19162 | 19343 | |||||
19480 | 19617 | |||||
19860 | 20045 | |||||
20294 | 20423 | |||||
20592 | 20692 | |||||
22110 | 22196 | |||||
22474 | 22626 | |||||
23027 | 23259 | |||||
23653 | 23821 | |||||
24002 | 24154 | |||||
24434 | 24613 | |||||
24963 | 25160 | |||||
25271 | 25378 | |||||
25899 | 26018 | |||||
26297 | 26457 | |||||
26580 | 26705 | |||||
27169 | 27382 | |||||
27707 | 27786 | |||||
28030 | 28249 | |||||
28409 | 28579 | |||||
28711 | 28834 | |||||
29152 | 29298 | |||||
29666 | 29788 | |||||
29929 | 30113 | |||||
30573 | 30747 | |||||
30959 | 31135 | |||||
31326 | 31421 | |||||
32054 | 32135 | |||||
32596 | 32678 | |||||
32930 | 33024 | |||||
DB_info | DB_remark | OVO-UNC-80 protein; contains similarity to Pfam domain PF15778 (UNC80 N-terminal); contains similarity to Interpro domain IPR031542 (Cation channel complex component UNC80, N-terminal) | ||||
Origin | From_laboratory | MGM | ||||
Species | Onchocerca volvulus | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00244388 | ||||
Corresponding_transcript | OVOC7579.1 | |||||
Corresponding_protein | OVP07446 | |||||
RNASeq_FPKM | WBls:0000104 (15) | |||||
WBls:0000107 | 2.95516 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395 | |||
WBls:0000108 | 11.8696 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392 | |||
1.54817 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391 | ||||
16.1551 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393 | ||||
WBls:0000664 | 6.26763 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397 | |||
7.15769 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396 | ||||
Method | curated |