WormBase Tree Display for CDS: OVOC8110
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OVOC8110 | Evidence | Curator_confirmed | WBPerson2062 | ||
---|---|---|---|---|---|
SMap | S_parent | Sequence | OVOC_OM3_71 | ||
Structure | Source_exons | 1 | 33 | ||
718 | 801 | ||||
1072 | 1171 | ||||
1565 | 1639 | ||||
1985 | 2190 | ||||
2861 | 3049 | ||||
3466 | 3576 | ||||
7826 | 7927 | ||||
DB_info | DB_remark | OVO-UNC-64 protein; contains similarity to Pfam domains PF00804 (Syntaxin), PF05739 (SNARE domain); contains similarity to Interpro domains IPR000727 (Target SNARE coiled-coil homology domain), IPR010989 (SNARE), IPR006011 (Syntaxin, N-terminal domain) | |||
Origin | From_laboratory | MBM | |||
Species | Onchocerca volvulus | ||||
Properties | Coding | CDS | |||
Prediction_status | Confirmed | ||||
Visible | Gene | WBGene00244919 | |||
Corresponding_transcript | OVOC8110.1 | ||||
Corresponding_protein | OVP14298 | ||||
Matching_cDNA | ovolvulus_GG317|c111_g2_i1 | Inferred_automatically | transcript_builder.pl | ||
Brief_identification | Syntaxin-1A homolog | Person_evidence | WBPerson2973 | ||
RNASeq_FPKM (4) | |||||
Remark | [140429 es9] Splice sites of OVOC8110 gene model corrected using RNA-Seq, protein evidence and SL1 data. | Curator_confirmed | WBPerson2062 | ||
Method | curated |