WormBase Tree Display for CDS: OVOC8842
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| OVOC8842 | SMap | S_parent | Sequence | OVOC_OM3_79 | ||
|---|---|---|---|---|---|---|
| Structure | Source_exons (28) | |||||
| DB_info | DB_remark | contains similarity to Pfam domains PF01490 (Transmembrane amino acid transporter protein), PF12894 (Anaphase-promoting complex subunit 4 WD40 domain), PF12896 (Anaphase-promoting complex, cyclosome, subunit 4); contains similarity to Interpro domains IPR024977 (Anaphase-promoting complex subunit 4-like, WD40 domain), IPR024790 (Anaphase-promoting complex subunit 4, long domain), IPR013057 (Amino acid transporter, transmembrane domain), IPR015943 (WD40/YVTN repeat-like-containing domain superfamily) | ||||
| Origin | From_laboratory | MGM | ||||
| Species | Onchocerca volvulus | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Partially_confirmed | |||||
| Visible | Gene | WBGene00245651 | ||||
| Corresponding_transcript | OVOC8842.1 | |||||
| Corresponding_protein | OVP12124 | |||||
| RNASeq_FPKM | WBls:0000104 (15) | |||||
| WBls:0000107 | 6.46379 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395 | |||
| WBls:0000108 | 11.5946 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391 | |||
| 16.3864 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392 | ||||
| 16.7337 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393 | ||||
| WBls:0000664 | 14.3909 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397 | |||
| 19.7997 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396 | ||||
| Method | curated |
