WormBase Tree Display for CDS: PPA04999
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PPA04999 | SMap | S_parent | Sequence | PPA_ChrV | |
---|---|---|---|---|---|
Structure | Source_exons (15) | ||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S311-8.28 | |
TREEFAM | TREEFAM_ID | TF315716 | |||
DB_remark | PPA-UNC-55 protein; contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor), PF00105 (Zinc finger, C4 type (two domains)); contains similarity to Interpro domains IPR013088 (Zinc finger, NHR/GATA-type), IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding domain), IPR035500 (Nuclear hormone receptor-like domain superfamily) | ||||
Origin | From_laboratory | RS | |||
Species | Pristionchus pacificus | ||||
Properties | Coding | CDS | |||
CDS_predicted_by | pristionchus.org | ||||
Prediction_status | Predicted | ||||
Visible | Gene | WBGene00094553 | |||
Corresponding_transcript | PPA04999.1 | ||||
Corresponding_protein | PP65260 | ||||
Corresponding_oligo_set | GPL14372_Probes_25605 | ||||
GPL14372_Probes_25606 | |||||
GPL14372_Probes_25607 | |||||
Microarray_results | GPL14372_Probes_25605 | ||||
GPL14372_Probes_25606 | |||||
GPL14372_Probes_25607 | |||||
RNASeq_FPKM (2) | |||||
Remark | [171116 mh6] renamed from gene-UMM-S311-8.28 | Curator_confirmed | WBPerson4055 | ||
Method | curated |