WormBase Tree Display for CDS: PPA07576
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PPA07576 | SMap | S_parent | Sequence | PPA_ChrIV | ||
---|---|---|---|---|---|---|
Structure | Source_exons (17) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMS-S233-15.53 | ||
DB_remark | PPA-DHP-2 protein; contains similarity to Pfam domain PF01979 (Amidohydrolase family); contains similarity to Interpro domains IPR032466 (Metal-dependent hydrolase), IPR011059 (Metal-dependent hydrolase, composite domain superfamily), IPR011778 (Hydantoinase/dihydropyrimidinase), IPR006680 (Amidohydrolase-related), IPR030633 () | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Partially_confirmed | |||||
Visible | Gene | WBGene00097130 | ||||
Corresponding_transcript | PPA07576.1 | |||||
Corresponding_protein | PP64691 | |||||
Corresponding_oligo_set | GPL14372_Probes_80203 | |||||
GPL14372_Probes_80204 | ||||||
GPL14372_Probes_80207 | ||||||
GPL14372_Probes_80208 | ||||||
GPL14372_Probes_80209 | ||||||
Microarray_results | GPL14372_Probes_80203 | |||||
GPL14372_Probes_80204 | ||||||
GPL14372_Probes_80207 | ||||||
GPL14372_Probes_80208 | ||||||
GPL14372_Probes_80209 | ||||||
RNASeq_FPKM | WBls:0000032 | 2.12144 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMS-S233-15.53 | Curator_confirmed | WBPerson4055 | |||
Method | curated |