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WormBase Tree Display for CDS: PPA08473

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Name Class

PPA08473SMapS_parentSequencePPA_ChrIII
StructureSource_exons (39)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S2864-5.32
DB_remarkPPA-UNC-16 protein; contains similarity to Pfam domains PF09744 (JNK_SAPK-associated protein-1), PF16471 (JNK-interacting protein leucine zipper II); contains similarity to Interpro domains IPR019143 (JNK/Rab-associated protein-1, N-terminal), IPR032486 (JNK-interacting protein, leucine zipper II), IPR011047 (Quinoprotein alcohol dehydrogenase-like superfamily), IPR039911 (JNK-interacting protein 3/4)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00098027
Corresponding_transcriptPPA08473.1
Corresponding_proteinPP58614
Corresponding_oligo_setGPL14372_Probes_27999
GPL14372_Probes_28000
GPL14372_Probes_28001
Microarray_resultsGPL14372_Probes_27999
GPL14372_Probes_28000
GPL14372_Probes_28001
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S2864-5.32Curator_confirmedWBPerson4055
Methodcurated