WormBase Tree Display for CDS: PPA12539
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PPA12539 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 80 | |||
129 | 366 | |||||
489 | 575 | |||||
642 | 727 | |||||
778 | 781 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S71-40.40 | ||
DB_remark | contains similarity to Pfam domain PF04729 (ASF1 like histone chaperone); contains similarity to Interpro domains IPR036747 (Histone chaperone ASF1-like superfamily), IPR006818 (Histone chaperone ASF1-like) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00102093 | ||||
Corresponding_transcript | PPA12539.1 | |||||
Corresponding_protein | PP58375 | |||||
Corresponding_oligo_set | GPL14372_Probes_10504 | |||||
GPL14372_Probes_10505 | ||||||
Microarray_results | GPL14372_Probes_10504 | |||||
GPL14372_Probes_10505 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S71-40.40 | Curator_confirmed | WBPerson4055 | |||
Method | curated |