WormBase Tree Display for CDS: PPA14634
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PPA14634 | SMap | S_parent | Sequence | PPA_ChrV | |
---|---|---|---|---|---|
Structure | Source_exons (46) | ||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S632-0.4 | |
DB_remark | PPA-SQV-4 protein; contains similarity to Pfam domains PF00984 (UDP-glucose/GDP-mannose dehydrogenase family, central domain), PF01391 (Collagen triple helix repeat (20 copies)), PF02191 (Olfactomedin-like domain), PF03720 (UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain), PF03721 (UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain); contains similarity to Interpro domains IPR001732 (UDP-glucose/GDP-mannose dehydrogenase, N-terminal), IPR014027 (UDP-glucose/GDP-mannose dehydrogenase, C-terminal), IPR036220 (UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily), IPR036291 (NAD(P)-binding domain superfamily), IPR008160 (Collagen triple helix repeat), IPR008927 (6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily), IPR003112 (Olfactomedin-like domain), IPR014026 (UDP-glucose/GDP-mannose dehydrogenase, dimerisation), IPR028356 (UDP-glucose 6-dehydrogenase, eukaryotic type), IPR017476 (UDP-glucose/GDP-mannose dehydrogenase) | ||||
Origin | From_laboratory | RS | |||
Species | Pristionchus pacificus | ||||
Properties | Coding | CDS | |||
CDS_predicted_by | pristionchus.org | ||||
Prediction_status | Partially_confirmed | ||||
Visible (8) | |||||
Method | curated |