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WormBase Tree Display for CDS: PPA17893

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Name Class

PPA17893SMapS_parentSequencePPA_ChrIII
StructureSource_exons (46)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S2874-6.44
DB_remarkcontains similarity to Pfam domains PF00069 (Protein kinase domain), PF02214 (BTB/POZ domain), PF03607 (Doublecortin); contains similarity to Interpro domains IPR011009 (Protein kinase-like domain superfamily), IPR000210 (BTB/POZ domain), IPR001680 (WD40 repeat), IPR000719 (Protein kinase domain), IPR036322 (WD40-repeat-containing domain superfamily), IPR003533 (Doublecortin domain), IPR011333 (SKP1/BTB/POZ domain superfamily), IPR036572 (Doublecortin domain superfamily), IPR003131 (Potassium channel tetramerisation-type BTB domain), IPR015943 (WD40/YVTN repeat-like-containing domain superfamily)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00107447
Corresponding_transcriptPPA17893.1
Corresponding_proteinPP70212
Corresponding_oligo_setGPL14372_Probes_21149
GPL14372_Probes_21150
GPL14372_Probes_73099
GPL14372_Probes_73101
GPL14372_Probes_73102
GPL14372_Probes_73103
GPL14372_Probes_73104
GPL14372_Probes_73105
Microarray_resultsGPL14372_Probes_21149
GPL14372_Probes_21150
GPL14372_Probes_73099
GPL14372_Probes_73101
GPL14372_Probes_73102
GPL14372_Probes_73103
GPL14372_Probes_73104
GPL14372_Probes_73105
RNASeq_FPKMWBls:00000322.16256From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S2874-6.44Curator_confirmedWBPerson4055
Methodcurated