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WormBase Tree Display for CDS: PPA22436

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Name Class

PPA22436SMapS_parentSequencePPA_ChrI
StructureSource_exons139
710769
25572618
30643148
36913766
40114123
42804414
47484869
51495218
DB_infoDatabasepristionchus.orgcdsgene-UMM-S196-12.21
TREEFAMTREEFAM_IDTF318243
DB_remarkPPA-UNC-98 protein; contains similarity to Pfam domain PF00096 (Zinc finger, C2H2 type); contains similarity to Interpro domains IPR036236 (Zinc finger C2H2 superfamily), IPR013087 (Zinc finger C2H2-type)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00111990
Corresponding_transcriptPPA22436.1
Corresponding_proteinPP51210
Corresponding_oligo_setGPL14372_Probes_6977
GPL14372_Probes_6978
GPL14372_Probes_6979
GPL14372_Probes_6981
Microarray_resultsGPL14372_Probes_6977
GPL14372_Probes_6978
GPL14372_Probes_6979
GPL14372_Probes_6981
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S196-12.21Curator_confirmedWBPerson4055
Methodcurated