WormBase Tree Display for CDS: PPA37033
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PPA37033 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons (14) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S57-28.9 | ||
DB_remark | PPA-UNC-61 protein; contains similarity to Pfam domain PF00735 (Septin); contains similarity to Interpro domains IPR027417 (P-loop containing nucleoside triphosphate hydrolase), IPR016491 (Septin), IPR030379 (Septin-type guanine nucleotide-binding (G) domain) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Partially_confirmed | |||||
Visible | Gene | WBGene00275402 | ||||
Corresponding_transcript | PPA37033.1 | |||||
Corresponding_protein | PP73528 | |||||
Corresponding_oligo_set | GPL14372_Probes_55210 | |||||
GPL14372_Probes_55211 | ||||||
GPL14372_Probes_55212 | ||||||
GPL14372_Probes_55213 | ||||||
GPL14372_Probes_55214 | ||||||
GPL14372_Probes_55215 | ||||||
Matching_cDNA | FG094950 | Inferred_automatically | transcript_builder.pl | |||
EB184205 | Inferred_automatically | transcript_builder.pl | ||||
Microarray_results | GPL14372_Probes_55210 | |||||
GPL14372_Probes_55211 | ||||||
GPL14372_Probes_55212 | ||||||
GPL14372_Probes_55213 | ||||||
GPL14372_Probes_55214 | ||||||
GPL14372_Probes_55215 | ||||||
RNASeq_FPKM | WBls:0000032 | 5.94017 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 28.0635 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |