WormBase Tree Display for Sequence: R08E3
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| R08E3 | DNA | R08E3 | 30300 | |||
|---|---|---|---|---|---|---|
| SMap | S_child | Gene_child | WBGene00201037 | 9267 | 9470 | |
| WBGene00196263 | 3613 | 3750 | ||||
| WBGene00196013 | 6331 | 6609 | ||||
| WBGene00201895 | 7147 | 6881 | ||||
| WBGene00201741 | 6675 | 7147 | ||||
| WBGene00019959 | 12098 | 15220 | ||||
| WBGene00200663 | 6826 | 6684 | ||||
| WBGene00199809 | 9471 | 9268 | ||||
| WBGene00019957 | 16152 | 28390 | ||||
| WBGene00197507 | 2869 | 3009 | ||||
| CDS_child (195) | ||||||
| Transcript (14) | ||||||
| PCR_product (13) | ||||||
| Allele (724) | ||||||
| Oligo_set | Aff_F39C12.1 | 29383 | 28512 | |||
| Aff_R08E3.1 | 26563 | 28290 | ||||
| Aff_R08E3.2 | 16433 | 18185 | ||||
| Aff_R08E3.3 | 13873 | 14916 | ||||
| Aff_R08E3.4 | 3110 | 1355 | ||||
| Feature_object | WBsf1005083 | 2575 | 2725 | |||
| WBsf1005084 | 2935 | 3085 | ||||
| WBsf1005085 | 3715 | 3865 | ||||
| WBsf1005086 | 5115 | 5265 | ||||
| WBsf1005087 | 5515 | 5665 | ||||
| WBsf1005088 | 6675 | 6825 | ||||
| WBsf1005089 | 9035 | 9185 | ||||
| WBsf1005090 | 9335 | 9485 | ||||
| WBsf1005091 | 14015 | 14056 | ||||
| WBsf1022854 | 2895 | 3045 | ||||
| WBsf1022855 | 3695 | 3845 | ||||
| WBsf1022856 | 5095 | 5245 | ||||
| WBsf1022857 | 5535 | 5685 | ||||
| WBsf1022858 | 6655 | 6805 | ||||
| WBsf1022859 | 13989 | 14056 | ||||
| WBsf003024 | 12103 | 12104 | ||||
| WBsf027001 | 3099 | 3098 | ||||
| WBsf027882 | 5042 | 5041 | ||||
| WBsf112337 | 12346 | 12346 | ||||
| WBsf112497 | 12286 | 12286 | ||||
| WBsf115626 | 102 | 102 | ||||
| WBsf116294 | 12227 | 12227 | ||||
| WBsf131962 | 4745 | 4744 | ||||
| WBsf131963 | 16165 | 16166 | ||||
| WBsf132266 | 3162 | 3161 | ||||
| WBsf204331 | 2176 | 2175 | ||||
| WBsf205902 | 1870 | 1870 | ||||
| WBsf205903 | 3011 | 3011 | ||||
| WBsf208741 | 27791 | 27791 | ||||
| WBsf210394 | 102 | 102 | ||||
| WBsf235628 | 14917 | 15002 | ||||
| WBsf235629 | 14917 | 15118 | ||||
| WBsf235630 | 14917 | 15158 | ||||
| WBsf235631 | 14917 | 15216 | ||||
| WBsf235632 | 28291 | 28382 | ||||
| WBsf257788 | 15217 | 15218 | ||||
| WBsf257790 | 27706 | 27707 | ||||
| WBsf257791 | 27563 | 27564 | ||||
| WBsf280137 | 17795 | 17796 | ||||
| WBsf638303 | 13491 | 13492 | ||||
| WBsf638568 | 15186 | 15187 | ||||
| WBsf638742 | 15169 | 15170 | ||||
| WBsf642440 | 18991 | 18992 | ||||
| WBsf974501 | 382 | 381 | ||||
| WBsf974502 | 720 | 719 | ||||
| WBsf974503 | 3395 | 3394 | ||||
| WBsf974505 | 12690 | 12691 | ||||
| WBsf974506 | 17694 | 17695 | ||||
| WBsf974507 | 27580 | 27581 | ||||
| WBsf552364 | 7104 | 7174 | ||||
| WBsf552506 | 11850 | 12039 | ||||
| WBsf552819 | 27930 | 28049 | ||||
| WBsf553286 | 708 | 4632 | ||||
| WBsf554503 | 11838 | 12061 | ||||
| WBsf555098 | 1065 | 4630 | ||||
| WBsf555602 | 190 | 531 | ||||
| WBsf555876 | 1840 | 4169 | ||||
| WBsf556362 | 6487 | 7414 | ||||
| WBsf556594 | 11790 | 12146 | ||||
| WBsf556998 | 633 | 965 | ||||
| WBsf557999 | 3070 | 3946 | ||||
| WBsf558043 | 2297 | 2684 | ||||
| WBsf558088 | 11768 | 12175 | ||||
| WBsf558093 | 12415 | 12792 | ||||
| WBsf558488 | 6669 | 7281 | ||||
| WBsf558859 | 15855 | 16136 | ||||
| WBsf558881 | 15195 | 15395 | ||||
| WBsf559361 | 6354 | 6667 | ||||
| WBsf559927 | 3175 | 3260 | ||||
| WBsf559980 | 6877 | 6997 | ||||
| WBsf562766 | 11727 | 12690 | ||||
| WBsf564061 | 2243 | 2522 | ||||
| WBsf565377 | 1895 | 4011 | ||||
| WBsf565431 | 6593 | 7492 | ||||
| WBsf566688 | 2276 | 3793 | ||||
| WBsf566782 | 11824 | 12071 | ||||
| WBsf567297 | 2276 | 3793 | ||||
| WBsf567408 | 6608 | 7078 | ||||
| WBsf567483 | 11824 | 12071 | ||||
| WBsf567855 | 11767 | 12201 | ||||
| WBsf569675 | 15747 | 16158 | ||||
| WBsf569742 | 15086 | 15473 | ||||
| WBsf569820 | 12310 | 12795 | ||||
| WBsf570656 | 6665 | 7125 | ||||
| WBsf571646 | 11840 | 12212 | ||||
| WBsf574045 | 788 | 1183 | ||||
| WBsf574228 | 15956 | 16124 | ||||
| WBsf574520 | 1725 | 1816 | ||||
| WBsf577282 | 6716 | 7207 | ||||
| WBsf577453 | 2300 | 3020 | ||||
| WBsf579089 | 976 | 5690 | ||||
| WBsf579394 | 12609 | 12822 | ||||
| WBsf579790 | 914 | 4008 | ||||
| WBsf580113 | 12443 | 12818 | ||||
| WBsf580543 | 15269 | 15326 | ||||
| WBsf582334 | 2237 | 4284 | ||||
| WBsf582701 | 15775 | 16173 | ||||
| WBsf582735 | 6568 | 7264 | ||||
| WBsf582878 | 12367 | 12805 | ||||
| WBsf583303 | 15126 | 15421 | ||||
| WBsf583620 | 11832 | 12144 | ||||
| WBsf584754 | 3118 | 3571 | ||||
| WBsf585488 | 11801 | 12144 | ||||
| WBsf586013 | 11761 | 12148 | ||||
| WBsf587329 | 3625 | 4061 | ||||
| WBsf587386 | 11803 | 12031 | ||||
| WBsf588148 | 3637 | 4027 | ||||
| WBsf588881 | 3623 | 4006 | ||||
| WBsf590264 | 11833 | 12145 | ||||
| WBsf590953 | 751 | 7412 | ||||
| WBsf591687 | 3362 | 3421 | ||||
| WBsf593001 | 12460 | 12566 | ||||
| WBsf595301 | 6594 | 7270 | ||||
| WBsf595716 | 2577 | 2697 | ||||
| WBsf597539 | 11799 | 12160 | ||||
| WBsf598130 | 12448 | 12707 | ||||
| WBsf598157 | 27926 | 27959 | ||||
| WBsf598382 | 15189 | 15412 | ||||
| WBsf601132 | 700 | 5189 | ||||
| WBsf601295 | 28129 | 28715 | ||||
| WBsf982162 | 2129 | 3857 | ||||
| WBsf044425 | 12022 | 12279 | ||||
| WBsf648043 | 3555 | 3560 | ||||
| WBsf648044 | 6251 | 6256 | ||||
| WBsf648045 | 9164 | 9195 | ||||
| WBsf648046 | 12025 | 12036 | ||||
| WBsf648047 | 16019 | 16050 | ||||
| WBsf662717 | 6843 | 6853 | ||||
| WBsf662718 | 7078 | 7152 | ||||
| WBsf662719 | 9428 | 9468 | ||||
| WBsf662720 | 12575 | 12587 | ||||
| WBsf670462 | 3763 | 3664 | ||||
| WBsf670463 | 4191 | 4191 | ||||
| WBsf670464 | 4462 | 4462 | ||||
| WBsf689723 | 2355 | 2357 | ||||
| WBsf689724 | 3068 | 3083 | ||||
| WBsf689725 | 3825 | 3913 | ||||
| WBsf689726 | 5746 | 5768 | ||||
| WBsf689727 | 6004 | 6004 | ||||
| WBsf689728 | 10715 | 10727 | ||||
| WBsf689729 | 10807 | 10837 | ||||
| WBsf711584 | 5547 | 5480 | ||||
| WBsf711585 | 6457 | 6440 | ||||
| WBsf711586 | 6520 | 6520 | ||||
| WBsf711587 | 8059 | 8040 | ||||
| WBsf711588 | 9256 | 9200 | ||||
| WBsf711589 | 10383 | 10383 | ||||
| WBsf711590 | 10665 | 10646 | ||||
| WBsf711591 | 11914 | 11889 | ||||
| WBsf711592 | 12561 | 12472 | ||||
| WBsf711593 | 15975 | 15971 | ||||
| WBsf716624 | 6716 | 7207 | ||||
| WBsf264042 | 15128 | 15603 | ||||
| WBsf266575 | 23510 | 23581 | ||||
| WBsf266576 | 23609 | 23662 | ||||
| Feature_data | R08E3:Polysome | 1 | 30300 | |||
| R08E3:TranscriptionallyActiveRegion | 1 | 30300 | ||||
| R08E3:ChIPSeqTF | 1 | 30300 | ||||
| R08E3:TRF | 1 | 30300 | ||||
| R08E3:Dust | 1 | 30300 | ||||
| R08E3:inverted | 1 | 30300 | ||||
| Homol_data (18) | ||||||
| Structure | From | Source | CHROMOSOME_X | |||
| Overlap_right | F39C12 | 28301 | ||||
| Overlap_left | F43C9 | |||||
| Clone_left_end | R08E3 | 195 | ||||
| Clone_right_end | F43C9 | 5359 | ||||
| DB_info | Database | EMBL | NDB_AC | FO081333 | ||
| NDB_ID | _U41027 | |||||
| NDB_SV | FO081333.1 | |||||
| Secondary_accession | U41027 | |||||
| DB_remark | The 5' clone is F43C9, 200 bp overlap; the 3' clone is F39C12, 2000 bp overlap. Actual start of this clone is at base position 195 of R08E3; actual end is at 10295 of F39C12. | |||||
| Keyword | HTG | |||||
| EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
| Origin | From_author | Hawkins J | ||||
| Wilson RK | ||||||
| From_laboratory | RW | |||||
| Date | 25 Aug 1995 00:00:00 | |||||
| Species | Caenorhabditis elegans | |||||
| Visible | Clone | R08E3 | ||||
| Properties | Genomic_canonical | |||||
| Checksum | MD5 | 65e148f7401008287bec23a55d60e16c | ||||
| Status | Shotgun | |||||
| Finished | ||||||
| Submitted | 25 Aug 1995 00:00:00 | |||||
| Map | Sequence-X | |||||
| Interpolated_map_position | X | -6.22764 | ||||
| Method | Genomic_canonical |
