WormBase Tree Display for Sequence: R31

R31 DNA: R31 20279
  SMap: S_child: Gene_child: WBGene00195624 12794 13105
        WBGene00220045 10313 10160
        WBGene00201844 13016 12804
        WBGene00011270 10644 17724
        WBGene00220046 14619 14742
      CDS_child: R31.2a 10644 17403
        R31.2a:wp177 10644 17403
        R31.2b 13447 17403
        R31.2b:wp177 13447 17403
        R31.2c 16427 17403
        R31.2d 16242 17403
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g15n11_x24_V_p 16427 17400
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g32n11_x24_V_p 10644 16540
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g83n11_x24_V_p 13447 13456
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g10n11_x24_V_p 16427 16540
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g43n11_x24_V_p 7808 7954
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g134_x24_V_m 18785 17744
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g156_x24_V_m 19858 19643
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g97_x24_V_p 16242 16328
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g102n11_x24_V_p 10644 17400
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g145_x24_V_m 19205 18834
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g42n11_x24_V_p 8101 8237
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g75_x24_V_p 8101 8234
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g15n11_x24_V_p 16427 16540
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g174_x24_V_m 19292 19075
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g122n11_x24_V_p 10644 17400
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g141_x24_V_p 16242 16328
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g115_x24_V_p 8904 8969
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g148_x24_V_p 13447 16540
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g106_x24_V_p 7015 7254
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g92_x24_V_p 7840 7953
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g93_x24_V_p 7840 8126
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g12n11_x24_V_p 16427 17400
        RNASEQ_embryo_him-8_20dC_post-L1_g110_x24_V_p 14025 17400
        RNASEQ_embryo_him-8_20dC_post-L1_g49s14k50_x24_V_p 8148 8430
        RNASEQ_embryo_him-8_20dC_post-L1_g120_x24_V_m 18882 18721
        RNASEQ_embryo_him-8_20dC_post-L1_g134_x24_V_p 16427 16540
        RNASEQ_embryo_him-8_20dC_post-L1_g122_x24_V_p 13447 13907
        RNASEQ_embryo_him-8_20dC_post-L1_g105_x24_V_m 18190 18062
        RNASEQ_embryo_him-8_20dC_post-L1_g60n11_x24_V_p 13799 13904
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g124n11_x24_V_p 10644 13456
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g22n11_x24_V_p 16427 16540
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g47n11_x24_V_p 8101 8117
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g101n11_x24_V_p 13447 17400
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g43n11_x24_V_p 8788 9209
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g182_x24_V_m 19205 19102
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g168_x24_V_m 18734 18131
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g171_x24_V_p 16242 16328
        RNASEQ_L4_soma_JK1107_no_DNaseI_g185_x24_V_p 16242 16328
        RNASEQ_L4_soma_JK1107_no_DNaseI_g91_x24_V_p 3325 9111
        RNASEQ_L4_soma_JK1107_no_DNaseI_g12n11_x24_V_p 16427 16540
        RNASEQ_L4_soma_JK1107_no_DNaseI_g72n11_x24_V_p 8904 9209
        RNASEQ_L4_soma_JK1107_no_DNaseI_g209_x24_V_p 300 444
        RNASEQ_L4_soma_JK1107_no_DNaseI_g50n11_x24_V_p 13447 13456
        RNASEQ_L4_soma_JK1107_no_DNaseI_g151_x24_V_p 1522 2229
        RNASEQ_L4_soma_JK1107_no_DNaseI_g118n11_x24_V_p 10644 17400
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g33n11_x24_V_p 8788 9111
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g148_x24_V_m 19205 18074
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g46n11_x24_V_p 13447 13456
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g186e15k70_x24_V_p 7808 8432
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g31_x24_V_p 8904 9209
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g172_x24_V_p 16427 16540
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g116n11_x24_V_p 10644 17400
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g34n11_x24_V_p 8101 8354
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g193_x24_V_m 19566 19320
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g226_x24_V_p 8101 8351
        RNASEQ_early_embryo_g6n11s13k769_x24_V_p 8148 8432
        RNASEQ_early_embryo_g99_x24_V_m 19858 17744
        RNASEQ_early_embryo_g59n11_x24_V_p 10644 16540
        RNASEQ_early_embryo_g50s14k82_x24_V_p 8148 8430
        RNASEQ_early_embryo_g9n11e13k63_x24_V_p 7808 8016
        RNASEQ_early_embryo_g44n11_x24_V_p 16427 17400
        RNASEQ_early_embryo_g50e14k63_x24_V_p 7808 8013
        RNASEQ_early_embryo_g50m15_x24_V_p 8101 8432
        RNASEQ_early_embryo_g6n11e13k63_x24_V_p 7829 8016
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g10n11s12k72_x24_V_p 7786 7954
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g1n11m6_x24_V_p 7829 8040
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g1n11_x24_V_p 1990 7954
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g122_x24_V_p 13447 17400
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g10n11m13_x24_V_p 7808 8040
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g5n11s5k1052_x24_V_p 8148 8432
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g188_x24_V_p 16427 16540
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g10n11m14_x24_V_p 8101 8432
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g92_x24_V_p 7136 7650
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g74n11_x24_V_p 10644 13456
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g41n11_x24_V_p 13447 14030
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g119n11_x24_V_p 16427 17400
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g155_x24_V_p 16242 16540
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g130_x24_V_m 19858 17744
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g93_x24_V_p 7808 7954
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g67n11_x24_V_p 13447 16540
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g151_x24_V_m 18854 18185
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g145_x24_V_m 19292 19209
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g11n11_x24_V_p 16427 17400
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g165_x24_V_m 19615 19507
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g88n11_x24_V_p 10644 13456
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g141_x24_V_p 7808 9209
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g13n11_x24_V_p 16427 16540
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g34_x24_V_p 8904 9111
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g106_x24_V_p 13447 17400
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g57n11_x24_V_p 8101 8348
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g172_x24_V_p 13447 16540
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g157_x24_V_p 16427 17400
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g36n11_x24_V_p 8788 9209
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g47n11_x24_V_p 7829 7954
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g51n11_x24_V_p 10644 16540
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g139_x24_V_p 16427 17400
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g78n11_x24_V_p 13447 13456
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g47n11s12k65_x24_V_p 7786 7954
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g47n11_x24_V_p 10644 16540
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g13n11_x24_V_p 16427 17400
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g49n11_x24_V_p 13447 13456
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g45n11_x24_V_p 7829 7954
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g137_x24_V_p 16242 16540
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g12n11_x24_V_p 16427 17400
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g67n11_x24_V_p 10644 14030
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g202_x24_V_p 8904 9111
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g71n11_x24_V_p 13447 13456
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g168_x24_V_p 16242 16540
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g83n11_x24_V_p 13447 13456
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g15n11_x24_V_p 16427 17400
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g61n11_x24_V_p 10644 14030
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g186_x24_V_m 18785 18732
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g204_x24_V_m 19482 19344
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g82_x24_V_m 17893 17744
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g159_x24_V_p 16242 16540
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g54n11_x24_V_p 10644 14030
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g13n11_x24_V_p 16427 17400
        R31.gc1 210 9212
        R31.gc2 10644 17579
        R31.gc3 19901 17741
        ContigV.elegans.jigsaw.2961.mRNA2961 10616 18062
        AG1201_RIT5M.3251.T1 4452 3865
        AG1201_R31.1.T1 8904 9212
        AG1201_R31.2.T4 10644 17403
        AG1201_R31.2.T3 13447 17403
        AG1201_R31.2.T1 16242 17403
        AG1201_RIT5P.2482.T1 17892 18050
      Transcript: R31.4 12794 13105
        R31.5 13016 12804
        R31.6 10313 10160
        R31.7 14619 14742
        R31.2a.1 10644 17724
        R31.2b.1 13447 17403
        R31.2c.1 16427 17403
        R31.2d.1 16119 17724
      PCR_product: cenix:38-f1 6852 7443
        cenix:46-e5 18088 19394
        cenix:52-e3 13378 14138
        mv_R31.2 10645 17401
        sjj_R31.2 16278 17386
        sjj_R31.3 17662 19837
        smd_R31.3 17893 19394
      Allele (245)
      Oligo_set: Aff_R31.1 8208 9212
        Aff_R31.2 16481 17403
        Aff_R31.3 18905 17741
      Feature_object (216)
      Feature_data: R31:Polysome 1 20279
        R31:TranscriptionallyActiveRegion 1 20279
        R31:ChIPSeqTF 1 20279
        R31:TRF 1 20279
        R31:Dust 1 20279
        R31:inverted 1 20279
      Homol_data (18)
  Structure: From: Source: CHROMOSOME_V
    Overlap_right: F58H1 20171
    Overlap_left: K12G11
    Clone_left_end: F58H1 20171
      R31 1
  DB_info: Database: EMBL NDB_AC Z75956
        NDB_SV Z75956.1
    Keyword: HTG
    EMBL_dump_info: EMBL_dump_method: worm_EMBL-dump
  Origin: From_author: Lennard N
    From_laboratory: HX
    Date_directory: 970620
    Species: Caenorhabditis elegans
    Strain: WBStrain00000001
  Visible: Clone: R31
  Properties: Genomic_canonical
    Checksum: MD5: aace8ab279d9fed82cf1f730922559c2
    Status: Finished: 20 Jun 1997 00:00:00
      Submitted: 13 Jul 1996 00:00:00
      Annotated: 23 Jun 1997 00:00:00
  Map: Sequence-V Ends: Left: 6798
        Right: 6818
  Interpolated_map_position: V 3.54104
  Assembly_tags: Clone left end 1 6 R31
      20171 20174 F58H1
    Finished Left 1 6
    Finished Right 20279 20276
  Method: Genomic_canonical