WormBase Tree Display for CDS: T07H8.4j
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| T07H8.4j | SMap | S_parent | Sequence | T07H8 | ||
|---|---|---|---|---|---|---|
| Structure | Source_exons | 1 | 141 | |||
| 392 | 480 | |||||
| 536 | 761 | |||||
| 853 | 964 | |||||
| 1132 | 1331 | |||||
| DB_info | Database | TrEMBL | UniProtAcc | A5A8R2 | ||
| UniProt | UniProtAcc | A5A8R2 | ||||
| AlphaFold | entry | A5A8R2 | ||||
| NCBI_protein | GI_number | GI:412982153 | ||||
| Protein_id | CHROMOSOME_V | CCD66564 | 2 | |||
| DB_remark | MEC-1 protein; contains similarity to Pfam domains PF00014 (Kunitz/Bovine pancreatic trypsin inhibitor domain), PF07645 (Calcium-binding EGF domain); contains similarity to Interpro domains IPR001881 (EGF-like calcium-binding domain), IPR036880 (Pancreatic trypsin inhibitor Kunitz domain superfamily), IPR000742 (EGF-like domain), IPR002223 (Pancreatic trypsin inhibitor Kunitz domain), IPR049883 (NOTCH1 EGF-like calcium-binding domain) | |||||
| Origin | From_laboratory | RW | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Isoform | Accession_evidence | EMBL | AY532176 | |||
| Visible | Gene | WBGene00003165 | ||||
| Corresponding_transcript | T07H8.4j.1 | |||||
| Corresponding_protein | CE47943 | |||||
| Corresponding_PCR_product | mv_T07H8.4 | |||||
| Corresponding_oligo_set (24) | ||||||
| Microarray_results (33) | ||||||
| Brief_identification | BPTI/Kunitz inhibitor domain-containing protein | Accession_evidence | UniProt | TR:A5A8R2 | ||
| RNASeq_FPKM (74) | ||||||
| Last_reviewed | 20 Apr 2007 00:00:00 | WBPerson1867 | ||||
| Remark | [20070420 po] made this isoform based on mRNA data(AY532176) | Curator_confirmed | WBPerson1867 | |||
| Method | curated |
