WormBase Tree Display for CDS: T10F2.5
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| T10F2.5 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | CHROMOSOME_III | |||
| Structure | Source_exons | 1 | 39 | |||
| 274 | 429 | |||||
| 476 | 694 | |||||
| DB_info | Database | TrEMBL | UniProtAcc | G4SNB8 | ||
| UniProt | UniProtAcc | G4SNB8 | ||||
| UniProt_GCRP | UniProtAcc | G4SNB8 | ||||
| AlphaFold | entry | G4SNB8 | ||||
| NCBI_protein | GI_number | GI:373220270 | ||||
| TREEFAM | TREEFAM_ID | TF323920 | ||||
| Protein_id | CHROMOSOME_III | CCD72870 | 1 | |||
| DB_remark | contains similarity to Pfam domain PF04628 (Sedlin, N-terminal conserved region); contains similarity to Interpro domains IPR011012 (Longin-like domain superfamily), IPR006722 (Trafficking protein particle complex subunit 2) | |||||
| Origin | From_laboratory | RW | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00044604 | ||||
| Corresponding_transcript | T10F2.5.1 | |||||
| Corresponding_protein | CE38978 | |||||
| Corresponding_oligo_set | A_12_P147805 | |||||
| A_12_P147806 | ||||||
| A_12_P147807 | ||||||
| GPL13394_WBGene00044604 | ||||||
| GPL13914_T10F2.5 | ||||||
| GPL14144_T10F2.5_217-276_0.958_1_A | ||||||
| GPL14144_T10F2.5_241-300_0.887_12_C | ||||||
| GPL14144_T10F2.5_73-132_0.928_6_B | ||||||
| GPL19516_CGZ0034605 | ||||||
| GPL21109_T10F2.5 | ||||||
| GPL8304_CE_WBGene00044604_A | ||||||
| GPL8673_T10F2_5P00037 | ||||||
| GPL8673_T10F2_5P00052 | ||||||
| GPL8673_T10F2_5P00177 | ||||||
| Matching_cDNA (30) | ||||||
| Microarray_results (14) | ||||||
| Brief_identification | Trafficking protein particle complex subunit 2-like protein | Accession_evidence | UniProt | TR:G4SNB8 | ||
| RNASeq_FPKM (74) | ||||||
| Last_reviewed | 20 Jul 2005 00:00:00 | WBPerson1867 | ||||
| Remark | [20050720 po] made this model based on briggsae homology and TEC-RED data | Curator_confirmed | WBPerson1867 | |||
| Associated_feature | WBsf017316 | |||||
| Method | curated |
