WormBase Tree Display for CDS: T11F9.9
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| T11F9.9 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | T11F9 | |||
| Structure | Source_exons | 1 | 162 | |||
| 208 | 945 | |||||
| DB_info | Database | TrEMBL | UniProtAcc | Q22393 | ||
| UniProt | UniProtAcc | Q22393 | ||||
| UniProt_GCRP | UniProtAcc | Q22393 | ||||
| AlphaFold | entry | Q22393 | ||||
| NCBI_protein | GI_number | GI:3879685 | ||||
| Protein_id | CHROMOSOME_V | CAA98525 | 1 | |||
| DB_remark | COL-157 protein; contains similarity to Pfam domains PF01391 (Collagen triple helix repeat (20 copies)), PF01484 (Nematode cuticle collagen N-terminal domain); contains similarity to Interpro domains IPR002486 (Nematode cuticle collagen, N-terminal), IPR008160 (Collagen triple helix repeat) | |||||
| Origin | From_laboratory | HX | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00000730 | ||||
| Corresponding_transcript | T11F9.9.1 | |||||
| Corresponding_protein | CE06421 | |||||
| Corresponding_PCR_product | TH:221-g5_2 | |||||
| cenix:221-g5_2 | ||||||
| cenix:239-d4 | ||||||
| mv_T11F9.9 | ||||||
| sjj_T11F9.9 | ||||||
| smd_T11F9.9 | ||||||
| Corresponding_oligo_set (13) | ||||||
| Matching_cDNA (20) | ||||||
| RNAi_result (12) | ||||||
| Microarray_results (14) | ||||||
| Brief_identification | Nematode cuticle collagen N-terminal domain-containing protein | Accession_evidence | UniProt | TR:Q22393 | ||
| RNASeq_FPKM (74) | ||||||
| Method | curated |
