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WormBase Tree Display for CDS: T12D8.8

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Name Class

T12D8.8EvidenceInferred_automaticallymake_isoforms.pl
SMapS_parentSequenceCHROMOSOME_III
StructureSource_exons1104
153518
562775
63156753
72187363
DB_infoDatabaseTrEMBLUniProtAccG5EE04
UniProtUniProtAccG5EE04
UniProt_GCRPUniProtAccG5EE04
AlphaFoldentryG5EE04
NCBI_proteinGI_numberGI:3879798
TREEFAMTREEFAM_IDTF313244
Protein_idCHROMOSOME_IIICAB033491
DB_remarkHIP-1 protein; contains similarity to Pfam domains PF13432 (Tetratricopeptide repeat), PF17830 (STI1/HOP, DP domain), PF18253 (Hsp70-interacting protein N N-terminal domain); contains similarity to Interpro domains IPR034649 (Hsp70-interacting protein, N-terminal), IPR006636 (Heat shock chaperonin-binding), IPR019734 (Tetratricopeptide repeat), IPR011990 (Tetratricopeptide-like helical domain superfamily), IPR041243 (STI1/HOP, DP domain)
OriginFrom_laboratoryHX
SpeciesCaenorhabditis elegans
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00011735
Corresponding_transcriptT12D8.8.1
T12D8.8.2
Corresponding_proteinCE16405
Corresponding_PCR_productTH:321G4
TH:325A1
TH:334F2
cenix:321-g4
cenix:325-a1
cenix:334-f2
mv_T12D8.8
sjj2_T12D8.8.1
sjj_T12D8.8
Corresponding_oligo_set (14)
Matching_cDNA (147)
RNAi_result (14)
Microarray_results (16)
Brief_identificationSTI1 domain-containing proteinAccession_evidenceUniProtTR:G5EE04
RNASeq_FPKM (74)
RemarkAnnotated using Pfam
Associated_featureWBsf005714
Methodcurated