WormBase Tree Display for CDS: T12D8.8
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T12D8.8 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | CHROMOSOME_III | |||
Structure | Source_exons | 1 | 104 | |||
153 | 518 | |||||
562 | 775 | |||||
6315 | 6753 | |||||
7218 | 7363 | |||||
DB_info | Database | TrEMBL | UniProtAcc | G5EE04 | ||
UniProt | UniProtAcc | G5EE04 | ||||
UniProt_GCRP | UniProtAcc | G5EE04 | ||||
AlphaFold | entry | G5EE04 | ||||
NCBI_protein | GI_number | GI:3879798 | ||||
TREEFAM | TREEFAM_ID | TF313244 | ||||
Protein_id | CHROMOSOME_III | CAB03349 | 1 | |||
DB_remark | HIP-1 protein; contains similarity to Pfam domains PF13432 (Tetratricopeptide repeat), PF17830 (STI1/HOP, DP domain), PF18253 (Hsp70-interacting protein N N-terminal domain); contains similarity to Interpro domains IPR034649 (Hsp70-interacting protein, N-terminal), IPR006636 (Heat shock chaperonin-binding), IPR019734 (Tetratricopeptide repeat), IPR011990 (Tetratricopeptide-like helical domain superfamily), IPR041243 (STI1/HOP, DP domain) | |||||
Origin | From_laboratory | HX | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00011735 | ||||
Corresponding_transcript | T12D8.8.1 | |||||
T12D8.8.2 | ||||||
Corresponding_protein | CE16405 | |||||
Corresponding_PCR_product | TH:321G4 | |||||
TH:325A1 | ||||||
TH:334F2 | ||||||
cenix:321-g4 | ||||||
cenix:325-a1 | ||||||
cenix:334-f2 | ||||||
mv_T12D8.8 | ||||||
sjj2_T12D8.8.1 | ||||||
sjj_T12D8.8 | ||||||
Corresponding_oligo_set (14) | ||||||
Matching_cDNA (147) | ||||||
RNAi_result (14) | ||||||
Microarray_results (16) | ||||||
Brief_identification | STI1 domain-containing protein | Accession_evidence | UniProt | TR:G5EE04 | ||
RNASeq_FPKM (74) | ||||||
Remark | Annotated using Pfam | |||||
Associated_feature | WBsf005714 | |||||
Method | curated |