WormBase Tree Display for Sequence: T18D3
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| T18D3 | DNA | T18D3 | 32602 | |||
|---|---|---|---|---|---|---|
| SMap | S_child | Gene_child (12) | ||||
| CDS_child (186) | ||||||
| Transcript (15) | ||||||
| Nongenomic | yk376f7 | 16865 | 19990 | |||
| PCR_product (24) | ||||||
| Allele (580) | ||||||
| Oligo_set | Aff_T18D3.1 | 18649 | 19738 | |||
| Aff_T18D3.2 | 22416 | 21170 | ||||
| Aff_T18D3.3 | 28175 | 26870 | ||||
| Aff_T18D3.5 | 25919 | 26478 | ||||
| Aff_T18D3.6 | 12234 | 12918 | ||||
| Aff_T18D3.7 | 4964 | 5341 | ||||
| Feature_object (326) | ||||||
| Feature_data | T18D3:Polysome | 1 | 32602 | |||
| T18D3:TranscriptionallyActiveRegion | 1 | 32602 | ||||
| T18D3:ChIPSeqTF | 1 | 32602 | ||||
| T18D3:TRF | 1 | 32602 | ||||
| T18D3:Dust | 1 | 32602 | ||||
| T18D3:inverted | 1 | 32602 | ||||
| Homol_data (21) | ||||||
| Structure | From | Source | CHROMOSOME_X | |||
| Overlap_right | F45E6 | 32503 | ||||
| Overlap_left | T24D3 | |||||
| Clone_left_end | T18D3 | 1 | ||||
| F45E6 | 32503 | |||||
| Clone_right_end | T24D3 | 19339 | ||||
| DB_info | Database | EMBL | NDB_AC | Z68119 | ||
| NDB_SV | Z68119.2 | |||||
| DB_remark | [121025] Sequence correction WBsf268212 : Insertion C1 bases from @ 2452 | |||||
| Keyword | HTG | |||||
| EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
| Origin | From_author | McMurray AA | ||||
| From_laboratory | HX | |||||
| Date_directory | 950412 | |||||
| Species | Caenorhabditis elegans | |||||
| Strain | WBStrain00000001 | |||||
| Visible | Clone | T18D3 | ||||
| Properties | Genomic_canonical | |||||
| Checksum | MD5 | 30ba60254b5be35fdb156d7eb986be7a | ||||
| Status | Finished | 12 Apr 1995 00:00:00 | ||||
| Submitted | 25 Nov 1995 00:00:00 | |||||
| Annotated | 24 Nov 1995 00:00:00 | |||||
| Map | Sequence-X | Ends | Left | 6714 | ||
| Right | 6735 | |||||
| Interpolated_map_position | X | 7.09586 | ||||
| Assembly_tags | Clone left end | 1 | 4 | left hand end of T18D3 | ||
| 32503 | 32506 | left hand end of F45E6 | ||||
| annotation | 9978 | 10002 | No good +ve strand data bases 9976 - 10000. Terminated on the -ve strand. Region has tandem repeat element starting with the motif GACCT. Whole region of repeat is from 9834-10016. The repeat may be causing the messiness of the +ve walk with oligo.11 | |||
| 21653 | 21718 | Poor +ve strand data over bases 21651 - 21715. Terminated on the -ve strand | ||||
| Clone right end | 19336 | 19339 | right hand end of T24D3 | |||
| Method | Genomic_canonical |
