WormBase Tree Display for CDS: T21D12.4
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T21D12.4 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | T21D12 | |||
Structure | Source_exons | 1 | 168 | |||
214 | 289 | |||||
335 | 522 | |||||
583 | 717 | |||||
1265 | 1555 | |||||
1611 | 1829 | |||||
2166 | 2216 | |||||
DB_info | Database | SwissProt | UniProtAcc | O16785 | ||
UniProt | UniProtAcc | O16785 | ||||
UniProt_GCRP | UniProtAcc | O16785 | ||||
AlphaFold | entry | O16785 | ||||
NCBI_protein | GI_number | GI:351064238 | ||||
TREEFAM | TREEFAM_ID | TF314025 | ||||
Protein_id | CHROMOSOME_IV | CCD72524 | 1 | |||
DB_remark | PAT-6 protein; contains similarity to Pfam domain PF00307 (Calponin homology (CH) domain); contains similarity to Interpro domains IPR001715 (Calponin homology domain), IPR028433 (Parvin), IPR036872 (CH domain superfamily) | |||||
Origin | From_laboratory | RW | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00003932 | ||||
Corresponding_transcript | T21D12.4.1 | |||||
Corresponding_protein | CE18268 | |||||
Corresponding_PCR_product | cenix:112-g4 | |||||
mv_G_YK2923 | ||||||
sjj_T21D12.4 | ||||||
Corresponding_oligo_set (12) | ||||||
Matching_cDNA (66) | ||||||
RNAi_result (32) | ||||||
Microarray_results (13) | ||||||
Brief_identification | Paralyzed arrest at two-fold protein 6 | Accession_evidence | UniProt | SP:O16785 | ||
RNASeq_FPKM (74) | ||||||
Associated_feature | WBsf008796 | |||||
Method | curated |