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WormBase Tree Display for CDS: T28D6.5d

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Name Class

T28D6.5dSMapS_parentSequenceCHROMOSOME_III
StructureSource_exons (11)
DB_infoDatabaseTrEMBLUniProtAccI2HAE9
UniProtUniProtAccI2HAE9
AlphaFoldentryI2HAE9
Protein_idCHROMOSOME_IIICCH638562
OriginFrom_laboratoryHX
SpeciesCaenorhabditis elegans
PropertiesCodingCDS
Prediction_statusConfirmed
IsoformFeature_evidenceWBsf027621
From_analysisRNASeq_Hillier_elegans
VisibleGeneWBGene00012125
Corresponding_transcriptT28D6.5d.1
Corresponding_proteinCE54070
Corresponding_PCR_productTH:325A8
TH:338E7
cenix:177-h1
cenix:325-a8
cenix:333-a4
cenix:338-e7
mv_T28D6.5
mv_T28D6.6
sjj_T28D6.5
sjj_Y47D3A.hh
Corresponding_oligo_set178274_at
Aff_T28D6.5
Aff_Y47D3A.HH
GPL14144_T28D6.5b_1714-1773_0.842_46_A
GPL14144_T28D6.5b_1881-1940_0.821_66_B
GPL8673_T28D6_5aP01015
GPL8673_T28D6_5aP01680
GPL8673_T28D6_5aP02193
GPL8673_T28D6_5bP02465
cea2.d.06122
Matching_cDNAyoung_adult_Nanopore_Roach_118753
adult_Nanopore_Roach_28059
L1_Nanopore_Roach_83740
L1_Nanopore_Roach_86903
adult_Nanopore_Roach_89725
RST5_373086Inferred_automaticallytranscript_builder.pl
RNAi_result (19)
Microarray_results (13)
Brief_identificationCUB domain-containing proteinAccession_evidenceUniProtTR:I2HAF1
RNASeq_FPKM (74)
Last_reviewed09 Jan 2020 15:58:27WBPerson4025
Remark[120328 pad] Created this modular 3 splice variant on exon 4 for 2 of the major isoforms.Curator_confirmedWBPerson1983
From_analysisRNASeq_Hillier_elegans
[200109 gw3] This CDS has been updated based on the RNAseq data.Curator_confirmedWBPerson4025
From_analysisRNASeq
Associated_featureWBsf027621
Methodcurated