WormBase Tree Display for Gene: WBGene00000281
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| WBGene00000281 | SMap | S_parent | Sequence | K05G3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | cah-3 | |||||||
| Sequence_name | K05G3.3 | ||||||||
| Molecular_name | K05G3.3 | ||||||||
| K05G3.3.1 | |||||||||
| CE04755 | |||||||||
| Other_name | CELE_K05G3.3 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | cah-3 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:20 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | cah | ||||||||
| Allele (47) | |||||||||
| Strain | WBStrain00026607 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00079901 | ||||||||
| 00079902 | |||||||||
| 00079903 | |||||||||
| 00079904 | |||||||||
| 00079905 | |||||||||
| 00079906 | |||||||||
| 00079907 | |||||||||
| 00107165 | |||||||||
| 00107166 | |||||||||
| Ortholog (57) | |||||||||
| Paralog | WBGene00000279 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00000280 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00000283 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00000282 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00000284 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | cah-3 encodes a putative carbonic anhydrase, closely similar to itsparalog CAH-5; cah-3 is expressed in intestine and head (includingneurons) of L3 larvae through adults, and its transcription ismoderately stimulated by DBL-1 and SMA-2; CAH-3 is bound by CKU-80 intwo-hybrid assays, but has no obvious function in mass RNAi assays. | Paper_evidence | WBPaper00003859 | |||||
| WBPaper00005039 | |||||||||
| Curator_confirmed | WBPerson567 | ||||||||
| WBPerson480 | |||||||||
| Date_last_updated | 02 May 2007 00:00:00 | ||||||||
| Automated_description | Predicted to enable carbonate dehydratase activity. Predicted to be involved in one-carbon metabolic process. Predicted to be located in cytoplasm. Expressed in pharynx; somatic cell; and vulva. Human ortholog(s) of this gene implicated in retinitis pigmentosa. Is an ortholog of human CA14 (carbonic anhydrase 14) and CA4 (carbonic anhydrase 4). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:10584 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:1375) | ||||
| Molecular_info | Corresponding_CDS | K05G3.3 | |||||||
| Corresponding_transcript | K05G3.3.1 | ||||||||
| Other_sequence (66) | |||||||||
| Associated_feature (11) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00033997 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00110317 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00016647 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00050013 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00090704 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr994 | ||||||||
| Expr9208 | |||||||||
| Expr9942 | |||||||||
| Expr13026 | |||||||||
| Expr15867 | |||||||||
| Expr1010754 | |||||||||
| Expr1030183 | |||||||||
| Expr1153706 | |||||||||
| Expr2009697 | |||||||||
| Expr2027936 | |||||||||
| Drives_construct | WBCnstr00013797 | ||||||||
| WBCnstr00014951 | |||||||||
| WBCnstr00015741 | |||||||||
| WBCnstr00037608 | |||||||||
| Construct_product | WBCnstr00015741 | ||||||||
| WBCnstr00037608 | |||||||||
| WBCnstr00038395 | |||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (184) | |||||||||
| Interaction (83) | |||||||||
| Map_info | Map | X | Position | 23.9952 | |||||
| Positive | Positive_clone | K05G3 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00037599 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00040475 | |||||||||
| WBPaper00040634 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Sequence connection from [Hewett-Emmett D] | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
