WormBase Tree Display for Gene: WBGene00000287
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| WBGene00000287 | SMap | S_parent | Sequence | CHROMOSOME_IV | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | cal-3 | Person_evidence | WBPerson261 | |||||
| Sequence_name | M02B7.6 | ||||||||
| Molecular_name | M02B7.6a | ||||||||
| M02B7.6a.1 | |||||||||
| CE39753 | |||||||||
| M02B7.6b | |||||||||
| CE12330 | |||||||||
| M02B7.6b.1 | |||||||||
| Other_name | CELE_M02B7.6 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | cal-3 | ||||||||
| DB_info | Database | AceView | gene | 4E594 | |||||
| WormQTL | gene | WBGene00000287 | |||||||
| WormFlux | gene | WBGene00000287 | |||||||
| NDB | locus_tag | CELE_M02B7.6 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00000287|UniProtKB=Q94288 | |||||||
| family | PTHR23050 | ||||||||
| NCBI | gene | 177143 | |||||||
| RefSeq | protein | NM_001307362.3 | |||||||
| NM_068020.7 | |||||||||
| TrEMBL | UniProtAcc | Q94288 | |||||||
| U4PQW9 | |||||||||
| UniProt_GCRP | UniProtAcc | Q94288 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:20 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | cal | ||||||||
| Allele (78) | |||||||||
| Strain | WBStrain00055624 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00087593 | ||||||||
| 00087594 | |||||||||
| 00107175 | |||||||||
| Ortholog (45) | |||||||||
| Paralog (18) | |||||||||
| Structured_description | Concise_description | cal-3 encodes a member of the calmodulin family. | Curator_confirmed | WBPerson48 | |||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable calcium ion binding activity. Human ortholog(s) of this gene implicated in Alzheimer's disease. Is an ortholog of human CALML3 (calmodulin like 3); CALML4 (calmodulin like 4); and CALML5 (calmodulin like 5). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:10652 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:18180) | ||||
| Molecular_info | Corresponding_CDS | M02B7.6a | |||||||
| M02B7.6b | |||||||||
| Corresponding_CDS_history | M02B7.6:wp154 | ||||||||
| Corresponding_transcript | M02B7.6a.1 | ||||||||
| M02B7.6b.1 | |||||||||
| Other_sequence | CJC00552_1 | ||||||||
| GE638461.1 | |||||||||
| Associated_feature | WBsf667857 | ||||||||
| WBsf996090 | |||||||||
| WBsf996091 | |||||||||
| WBsf229922 | |||||||||
| WBsf229923 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00050813 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00034379 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1013285 | ||||||||
| Expr1154504 | |||||||||
| Expr2009703 | |||||||||
| Expr2027942 | |||||||||
| Drives_construct | WBCnstr00037603 | ||||||||
| Construct_product | WBCnstr00037603 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (90) | |||||||||
| Interaction | WBInteraction000186349 | ||||||||
| WBInteraction000311800 | |||||||||
| WBInteraction000314778 | |||||||||
| WBInteraction000321149 | |||||||||
| WBInteraction000391024 | |||||||||
| WBInteraction000425085 | |||||||||
| Map_info | Map | IV | Position | -2.1341 | Error | 0.012716 | |||
| Positive | Positive_clone | M02B7 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00019540 | ||||||||
| WBPaper00030971 | |||||||||
| Remark | Sequence connection from [Schulze E, Karabinos A, Weber K], 02/06/11 krb | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
