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WormBase Tree Display for Gene: WBGene00000366

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Name Class

WBGene00000366SMapS_parentSequenceR10E11
IdentityVersion1
NameCGC_namecbp-1Person_evidenceWBPerson419
Sequence_nameR10E11.1
Molecular_nameR10E11.1a
R10E11.1a.1
CE47039
R10E11.1b
CE46860
R10E11.1c
CE46909
R10E11.1a.2
R10E11.1b.1
R10E11.1c.1
Other_namecep-1
CBDPaper_evidenceWBPaper00044307
CELE_R10E11.1Accession_evidenceNDBBX284603
Public_namecbp-1
DB_infoDatabase (14)
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:20WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcbp
Allele (120)
Legacy_information[Mello C] cbp for CBP/p300 related gene. No mutants known. Predicted gene R10E11.1
StrainWBStrain00002432
WBStrain00002490
WBStrain00040750
WBStrain00026532
WBStrain00036243
WBStrain00040749
RNASeq_FPKM (74)
GO_annotation (41)
OrthologWBGene00055028Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00031464Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00158587Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00124273Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00114963Pristionchus pacificusFrom_analysisInparanoid_8
WormBase-Compara
WBGene00225588Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g4114Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g11971Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g15448Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g9685Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g16875Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g14199Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g20207Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g6339Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g18255Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g4576Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g3443Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00081.g3745Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-cbp-1Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g9443Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00071.g3333Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_23438Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_009510Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g08331Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g1398Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g1452Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_30200200Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrIII_pilon.g8699Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00244519Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00278407Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00262818Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00293376Trichuris murisFrom_analysisWormBase-Compara
FB:FBgn0261617Drosophila melanogasterFrom_analysisHieranoid
Inparanoid
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
ZFIN:ZDB-GENE-080403-16Danio rerioFrom_analysisHieranoid
Inparanoid
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
ZFIN:ZDB-GENE-080403-15Danio rerioFrom_analysisHieranoid
Inparanoid
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
ZFIN:ZDB-GENE-050208-439Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
ZFIN:ZDB-GENE-050302-102Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
HGNC:2348Homo sapiensFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
HGNC:3373Homo sapiensFrom_analysisHieranoid
Inparanoid
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
MGI:1098280Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
MGI:1276116Mus musculusFrom_analysisHieranoid
Inparanoid
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
RGD:2401Rattus norvegicusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
ParalogWBGene00010545Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00016220Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00009595Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00016221Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00008209Caenorhabditis elegansFrom_analysisPanther
Structured_descriptionConcise_descriptioncbp-1 encodes a homolog of the mammalian transcriptional cofactors CBP (OMIM:600140) and p300 (E1A-BINDING PROTEIN, 300-KD; OMIM:602700) that have been shown to possess histone acetyltransferase activity, and which, when mutated, lead to Rubinstein-Taybi syndrome (OMIM:180849) and colorectal cancer (OMIM:114500); at least one splicing form of CBP-1 exhibits histone acetyltransferase (HAT) activity in vitro and has a glutamine/asparagine-rich domain; CBP-1 is required during embryogenesis for differentiation of all non-neuronal somatic cell types; CBP-1 is expressed very early in embryogenesis, suggesting that it may interact with maternally provided transcription factors, such as SKN-1, to specific developmental fates.Paper_evidenceWBPaper00003050
WBPaper00005068
WBPaper00005101
WBPaper00005137
WBPaper00012788
WBPaper00012830
WBPaper00012882
WBPaper00012897
WBPaper00013003
Curator_confirmedWBPerson1843
WBPerson567
Date_last_updated17 Jun 2004 00:00:00
Automated_descriptionEnables RNA polymerase II-specific DNA-binding transcription factor binding activity; histone acetyltransferase activity; and lysine N-acetyltransferase activity, acting on acetyl phosphate as donor. Involved in several processes, including positive regulation of transcription by RNA polymerase II; regulation of distal tip cell migration; and spermatogenesis. Located in cytoplasm and nucleus. Expressed in alimentary system; distal tip cell; head; and tail. Human ortholog(s) of this gene implicated in several diseases, including Alzheimer's disease; Huntington's disease; Rubinstein-Taybi syndrome; and leukemia (multiple). Is an ortholog of human CREBBP (CREB binding protein).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoPotential_model (16)
Modifies_diseaseDOID:10652
Modifies_disease_in_annotationWBDOannot00001083
Molecular_infoCorresponding_CDSR10E11.1a
R10E11.1b
R10E11.1c
Corresponding_CDS_historyR10E11.1a:wp229
R10E11.1b:wp229
R10E11.1c:wp229
Corresponding_transcriptR10E11.1a.1
R10E11.1a.2
R10E11.1b.1
R10E11.1c.1
Other_sequence (42)
Associated_feature (17)
Transcription_factorWBTranscriptionFactor000427
Experimental_infoRNAi_result (128)
Expr_pattern (14)
Drives_constructWBCnstr00003040
WBCnstr00003080
WBCnstr00004515
WBCnstr00004534
WBCnstr00005915
WBCnstr00005916
WBCnstr00019390
Construct_productWBCnstr00005915
WBCnstr00005916
WBCnstr00040741
AntibodyWBAntibody00000452
WBAntibody00000453
WBAntibody00002112
Microarray_results (31)
Expression_cluster (147)
Interaction (302)
WBProcessWBbiopr:00000070
Map_infoMapIIIPosition0.996159Error0.002046
PositivePositive_cloneR10E11Person_evidenceWBPerson419
Inferred_automaticallyFrom sequence, transcript, pseudogene data
Mapping_dataMulti_point4177
4195
Pseudo_map_position
Reference (200)
PictureWBPicture0000013084
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
cep-1 has been used as an unapproved name for what is the CGC approved cbp-1 (R10E11.1). The real CGC approved cep-1 (F52B5.5) is a p53 homolog, whereas the approved cbp-1 is a p300 homologPaper_evidenceWBPaper00004757
MethodGene