WormBase Tree Display for Gene: WBGene00000422
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| WBGene00000422 | Evidence | CGC_data_submission | |||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | F08F1 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | ced-8 | Person_evidence | WBPerson261 | |||||
| Sequence_name | F08F1.5 | ||||||||
| Molecular_name | F08F1.5 | ||||||||
| F08F1.5.1 | |||||||||
| CE34294 | |||||||||
| Other_name | CELE_F08F1.5 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | ced-8 | ||||||||
| DB_info | Database | AceView | gene | XJ34 | |||||
| WormQTL | gene | WBGene00000422 | |||||||
| WormFlux | gene | WBGene00000422 | |||||||
| NDB | locus_tag | CELE_F08F1.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00000422|UniProtKB=O17386 | |||||||
| family | PTHR16024 | ||||||||
| NCBI | gene | 184190 | |||||||
| RefSeq | protein | NM_077026.10 | |||||||
| SwissProt | UniProtAcc | O17386 | |||||||
| TREEFAM | TREEFAM_ID | TF316454 | |||||||
| UniProt_GCRP | UniProtAcc | O17386 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:20 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ced | ||||||||
| Allele (64) | |||||||||
| Legacy_information | [C.elegansII] n1891 : programmed cell deaths abnormal and protracted; dying cells arrest at highly refractile stage; killer cells fail to engulf target cells; superficially resembles engulfment group A (ced-1,6,7); but synergizes with weak ced-3 alleles in preventing cell death; no gross phenotype. OA3: n1999, n2090, n2093. Cloned: encodes predicted novel protein. [Ellis et al. 1991; MT] | ||||||||
| Strain | WBStrain00027186 | ||||||||
| WBStrain00027187 | |||||||||
| WBStrain00037401 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00029674 | ||||||||
| 00029675 | |||||||||
| 00029676 | |||||||||
| 00029677 | |||||||||
| 00029678 | |||||||||
| 00029679 | |||||||||
| 00029680 | |||||||||
| 00029681 | |||||||||
| 00029682 | |||||||||
| 00029683 | |||||||||
| 00029684 | |||||||||
| 00029685 | |||||||||
| 00029686 | |||||||||
| 00029687 | |||||||||
| 00029688 | |||||||||
| 00029689 | |||||||||
| 00029690 | |||||||||
| 00029691 | |||||||||
| 00029692 | |||||||||
| 00029693 | |||||||||
| 00029694 | |||||||||
| 00029695 | |||||||||
| 00029696 | |||||||||
| 00029697 | |||||||||
| 00029698 | |||||||||
| 00029699 | |||||||||
| 00029700 | |||||||||
| 00029701 | |||||||||
| 00029702 | |||||||||
| 00029703 | |||||||||
| 00029704 | |||||||||
| 00107381 | |||||||||
| Ortholog (52) | |||||||||
| Structured_description | Concise_description | The ced-8 gene encodes a homolog of the human putative membrane transporter XK; ced-8 is required for apoptosis to occur with normal speed during embryonic development. | Paper_evidence | WBPaper00003983 | |||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Enables phospholipid scramblase activity. Involved in apoptotic process; embryo development; and engulfment of apoptotic cell. Located in plasma membrane. Is an ortholog of human XKR6 (XK related 6). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F08F1.5 | |||||||
| Corresponding_CDS_history | F08F1.5:wp102 | ||||||||
| Corresponding_transcript | F08F1.5.1 | ||||||||
| Other_sequence | Acan_isotig20595 | ||||||||
| Associated_feature | WBsf654212 | ||||||||
| WBsf1006142 | |||||||||
| WBsf1006143 | |||||||||
| WBsf237679 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00001054 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00044010 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00012898 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00012899 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00030650 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr11381 | ||||||||
| Expr1026179 | |||||||||
| Expr1030238 | |||||||||
| Expr1147977 | |||||||||
| Expr2009852 | |||||||||
| Expr2028092 | |||||||||
| Drives_construct | WBCnstr00016070 | ||||||||
| WBCnstr00018810 | |||||||||
| WBCnstr00037554 | |||||||||
| Construct_product | WBCnstr00018810 | ||||||||
| WBCnstr00037554 | |||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (183) | |||||||||
| Interaction (65) | |||||||||
| WBProcess | WBbiopr:00000014 | ||||||||
| WBbiopr:00000015 | |||||||||
| Map_info | Map | X | Position | -0.106284 | Error | 0.004973 | |||
| Well_ordered | |||||||||
| Positive | Positive_clone | F08F1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 1571 | |||||||
| 1738 | |||||||||
| 1739 | |||||||||
| 1740 | |||||||||
| 1741 | |||||||||
| 1742 | |||||||||
| 2211 | |||||||||
| 4088 | |||||||||
| 4755 | |||||||||
| Pos_neg_data | 4982 | ||||||||
| 4983 | |||||||||
| 4984 | |||||||||
| Reference (50) | |||||||||
| Remark | Sequence connection from [Stanfield GM] | ||||||||
| Method | Gene |
