WormBase Tree Display for Gene: WBGene00000422
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WBGene00000422 | Evidence | CGC_data_submission | |||||||
---|---|---|---|---|---|---|---|---|---|
SMap | S_parent | Sequence | F08F1 | ||||||
Identity | Version | 1 | |||||||
Name | CGC_name | ced-8 | Person_evidence | WBPerson261 | |||||
Sequence_name | F08F1.5 | ||||||||
Molecular_name | F08F1.5 | ||||||||
F08F1.5.1 | |||||||||
CE34294 | |||||||||
Other_name | CELE_F08F1.5 | Accession_evidence | NDB | BX284606 | |||||
Public_name | ced-8 | ||||||||
DB_info | Database | AceView | gene | XJ34 | |||||
WormQTL | gene | WBGene00000422 | |||||||
WormFlux | gene | WBGene00000422 | |||||||
NDB | locus_tag | CELE_F08F1.5 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00000422|UniProtKB=O17386 | |||||||
family | PTHR16024 | ||||||||
NCBI | gene | 184190 | |||||||
RefSeq | protein | NM_077026.10 | |||||||
SwissProt | UniProtAcc | O17386 | |||||||
TREEFAM | TREEFAM_ID | TF316454 | |||||||
UniProt_GCRP | UniProtAcc | O17386 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:20 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | ced | ||||||||
Allele (64) | |||||||||
Legacy_information | [C.elegansII] n1891 : programmed cell deaths abnormal and protracted; dying cells arrest at highly refractile stage; killer cells fail to engulf target cells; superficially resembles engulfment group A (ced-1,6,7); but synergizes with weak ced-3 alleles in preventing cell death; no gross phenotype. OA3: n1999, n2090, n2093. Cloned: encodes predicted novel protein. [Ellis et al. 1991; MT] | ||||||||
Strain | WBStrain00027186 | ||||||||
WBStrain00027187 | |||||||||
WBStrain00037401 | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (32) | |||||||||
Ortholog (52) | |||||||||
Structured_description | Concise_description | The ced-8 gene encodes a homolog of the human putative membrane transporter XK; ced-8 is required for apoptosis to occur with normal speed during embryonic development. | Paper_evidence | WBPaper00003983 | |||||
Curator_confirmed | WBPerson567 | ||||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
Automated_description | Enables phospholipid scramblase activity. Involved in apoptotic process; embryo development; and engulfment of apoptotic cell. Located in plasma membrane. Is an ortholog of human XKR6 (XK related 6). | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F08F1.5 | |||||||
Corresponding_CDS_history | F08F1.5:wp102 | ||||||||
Corresponding_transcript | F08F1.5.1 | ||||||||
Other_sequence | Acan_isotig20595 | ||||||||
Associated_feature | WBsf654212 | ||||||||
WBsf1006142 | |||||||||
WBsf1006143 | |||||||||
WBsf237679 | |||||||||
Experimental_info | RNAi_result | WBRNAi00001054 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00044010 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00012898 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00012899 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00030650 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr11381 | ||||||||
Expr1026179 | |||||||||
Expr1030238 | |||||||||
Expr1147977 | |||||||||
Expr2009852 | |||||||||
Expr2028092 | |||||||||
Drives_construct | WBCnstr00016070 | ||||||||
WBCnstr00018810 | |||||||||
WBCnstr00037554 | |||||||||
Construct_product | WBCnstr00018810 | ||||||||
WBCnstr00037554 | |||||||||
Microarray_results (19) | |||||||||
Expression_cluster (183) | |||||||||
Interaction | WBInteraction000000972 | ||||||||
WBInteraction000001035 | |||||||||
WBInteraction000001036 | |||||||||
WBInteraction000001037 | |||||||||
WBInteraction000001376 | |||||||||
WBInteraction000001864 | |||||||||
WBInteraction000001867 | |||||||||
WBInteraction000004605 | |||||||||
WBInteraction000004657 | |||||||||
WBInteraction000005452 | |||||||||
WBInteraction000009816 | |||||||||
WBInteraction000009817 | |||||||||
WBInteraction000030041 | |||||||||
WBInteraction000030053 | |||||||||
WBInteraction000030068 | |||||||||
WBInteraction000030069 | |||||||||
WBInteraction000052287 | |||||||||
WBInteraction000052381 | |||||||||
WBInteraction000052383 | |||||||||
WBInteraction000153215 | |||||||||
WBInteraction000160379 | |||||||||
WBInteraction000163072 | |||||||||
WBInteraction000165510 | |||||||||
WBInteraction000165521 | |||||||||
WBInteraction000165533 | |||||||||
WBInteraction000165534 | |||||||||
WBInteraction000165535 | |||||||||
WBInteraction000165573 | |||||||||
WBInteraction000172118 | |||||||||
WBInteraction000177223 | |||||||||
WBInteraction000187410 | |||||||||
WBInteraction000198504 | |||||||||
WBInteraction000209218 | |||||||||
WBInteraction000224053 | |||||||||
WBInteraction000238882 | |||||||||
WBInteraction000267491 | |||||||||
WBInteraction000293913 | |||||||||
WBInteraction000301592 | |||||||||
WBInteraction000307910 | |||||||||
WBInteraction000316955 | |||||||||
WBInteraction000330534 | |||||||||
WBInteraction000358257 | |||||||||
WBInteraction000369292 | |||||||||
WBInteraction000369999 | |||||||||
WBInteraction000385658 | |||||||||
WBInteraction000386503 | |||||||||
WBInteraction000391651 | |||||||||
WBInteraction000395960 | |||||||||
WBInteraction000411724 | |||||||||
WBInteraction000411732 | |||||||||
WBInteraction000416659 | |||||||||
WBInteraction000421318 | |||||||||
WBInteraction000427007 | |||||||||
WBInteraction000429420 | |||||||||
WBInteraction000431014 | |||||||||
WBInteraction000431627 | |||||||||
WBInteraction000441552 | |||||||||
WBInteraction000458816 | |||||||||
WBInteraction000460918 | |||||||||
WBInteraction000519145 | |||||||||
WBInteraction000520805 | |||||||||
WBInteraction000521611 | |||||||||
WBInteraction000521776 | |||||||||
WBInteraction000521780 | |||||||||
WBInteraction000541030 | |||||||||
WBProcess | WBbiopr:00000014 | ||||||||
WBbiopr:00000015 | |||||||||
Map_info | Map | X | Position | -0.106284 | Error | 0.004973 | |||
Well_ordered | |||||||||
Positive | Positive_clone | F08F1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Mapping_data | Multi_point | 1571 | |||||||
1738 | |||||||||
1739 | |||||||||
1740 | |||||||||
1741 | |||||||||
1742 | |||||||||
2211 | |||||||||
4088 | |||||||||
4755 | |||||||||
Pos_neg_data | 4982 | ||||||||
4983 | |||||||||
4984 | |||||||||
Reference (50) | |||||||||
Remark | Sequence connection from [Stanfield GM] | ||||||||
Method | Gene |