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WormBase Tree Display for Gene: WBGene00000422

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Name Class

WBGene00000422EvidenceCGC_data_submission
SMapS_parentSequenceF08F1
IdentityVersion1
NameCGC_nameced-8Person_evidenceWBPerson261
Sequence_nameF08F1.5
Molecular_nameF08F1.5
F08F1.5.1
CE34294
Other_nameCELE_F08F1.5Accession_evidenceNDBBX284606
Public_nameced-8
DB_infoDatabaseAceViewgeneXJ34
WormQTLgeneWBGene00000422
WormFluxgeneWBGene00000422
NDBlocus_tagCELE_F08F1.5
PanthergeneCAEEL|WormBase=WBGene00000422|UniProtKB=O17386
familyPTHR16024
NCBIgene184190
RefSeqproteinNM_077026.10
SwissProtUniProtAccO17386
TREEFAMTREEFAM_IDTF316454
UniProt_GCRPUniProtAccO17386
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:20WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classced
Allele (64)
Legacy_information[C.elegansII] n1891 : programmed cell deaths abnormal and protracted; dying cells arrest at highly refractile stage; killer cells fail to engulf target cells; superficially resembles engulfment group A (ced-1,6,7); but synergizes with weak ced-3 alleles in preventing cell death; no gross phenotype. OA3: n1999, n2090, n2093. Cloned: encodes predicted novel protein. [Ellis et al. 1991; MT]
StrainWBStrain00027186
WBStrain00027187
WBStrain00037401
RNASeq_FPKM (74)
GO_annotation (32)
OrthologWBGene00065497Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00041249Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00144592Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00110140Pristionchus pacificusFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00130737Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00223458Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g3036Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g3026Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g724Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g9045Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g5060Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g19038Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g12254Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g1656Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g16259Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g2634Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00267.g8163Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-ced-8Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g11022Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00097.g4166Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_02015Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_025305Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g12191Oscheius tipulaeFrom_analysisWormBase-Compara
Sp34_X0164400Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrX_pilon.g19574Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00241457Onchocerca volvulusFrom_analysisWormBase-Compara
FB:FBgn0052579Drosophila melanogasterFrom_analysisHieranoid
Inparanoid
OrthoFinder
Panther
ZFIN:ZDB-GENE-091214-2Danio rerioFrom_analysisHieranoid
Inparanoid
OMA
OrthoFinder
Panther
SonicParanoid
ZFIN:ZDB-GENE-051113-336Danio rerioFrom_analysisHieranoid
Inparanoid
OrthoFinder
Panther
SonicParanoid
ZFIN:ZDB-GENE-041010-107Danio rerioFrom_analysisHieranoid
Inparanoid
OrthoFinder
Panther
PhylomeDB
ZFIN:ZDB-GENE-060421-6224Danio rerioFrom_analysisHieranoid
Panther
PhylomeDB
ZFIN:ZDB-GENE-051030-45Danio rerioFrom_analysisHieranoid
Inparanoid
OrthoFinder
Panther
SonicParanoid
ZFIN:ZDB-GENE-040724-153Danio rerioFrom_analysisHieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
SonicParanoid
ZFIN:ZDB-GENE-110106-2Danio rerioFrom_analysisHieranoid
OMA
Panther
PhylomeDB
ZFIN:ZDB-GENE-110106-1Danio rerioFrom_analysisHieranoid
Panther
PhylomeDB
ZFIN:ZDB-GENE-120215-27Danio rerioFrom_analysisHieranoid
Panther
PhylomeDB
ZFIN:ZDB-GENE-131121-106Danio rerioFrom_analysisHieranoid
Inparanoid
OMA
OrthoFinder
Panther
SonicParanoid
HGNC:25508Homo sapiensFrom_analysisHieranoid
OMA
OrthoFinder
Panther
PhylomeDB
HGNC:29394Homo sapiensFrom_analysisHieranoid
Inparanoid
OrthoFinder
Panther
SonicParanoid
HGNC:27806Homo sapiensFrom_analysisHieranoid
Inparanoid
OrthoFinder
OrthoInspector
Panther
SonicParanoid
HGNC:23062Homo sapiensFrom_analysisHieranoid
Inparanoid
OrthoFinder
Panther
SonicParanoid
HGNC:20937Homo sapiensFrom_analysisHieranoid
OMA
Panther
PhylomeDB
MGI:2447765Mus musculusFrom_analysisHieranoid
Inparanoid
OrthoFinder
OrthoInspector
Panther
SonicParanoid
MGI:3526711Mus musculusFrom_analysisHieranoid
Inparanoid
OrthoFinder
OrthoInspector
Panther
SonicParanoid
MGI:2686466Mus musculusFrom_analysisHieranoid
OMA
OrthoInspector
Panther
PhylomeDB
MGI:2685877Mus musculusFrom_analysisHieranoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
MGI:3528744Mus musculusFrom_analysisHieranoid
Inparanoid
OrthoFinder
OrthoInspector
Panther
SonicParanoid
RGD:1549780Rattus norvegicusFrom_analysisHieranoid
Inparanoid
OrthoFinder
OrthoInspector
Panther
SonicParanoid
RGD:1310719Rattus norvegicusFrom_analysisHieranoid
Inparanoid
OrthoFinder
OrthoInspector
Panther
SonicParanoid
RGD:1359224Rattus norvegicusFrom_analysisHieranoid
Inparanoid
OrthoFinder
OrthoInspector
Panther
SonicParanoid
RGD:1305649Rattus norvegicusFrom_analysisHieranoid
OMA
OrthoFinder
OrthoInspector
Panther
RGD:1359260Rattus norvegicusFrom_analysisHieranoid
OMA
OrthoInspector
Panther
Structured_descriptionConcise_descriptionThe ced-8 gene encodes a homolog of the human putative membrane transporter XK; ced-8 is required for apoptosis to occur with normal speed during embryonic development.Paper_evidenceWBPaper00003983
Curator_confirmedWBPerson567
Date_last_updated17 Jun 2004 00:00:00
Automated_descriptionEnables phospholipid scramblase activity. Involved in apoptotic process; embryo development; and engulfment of apoptotic cell. Located in plasma membrane. Is an ortholog of human XKR6 (XK related 6).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF08F1.5
Corresponding_CDS_historyF08F1.5:wp102
Corresponding_transcriptF08F1.5.1
Other_sequenceAcan_isotig20595
Associated_featureWBsf654212
WBsf1006142
WBsf1006143
WBsf237679
Experimental_infoRNAi_resultWBRNAi00001054Inferred_automaticallyRNAi_primary
WBRNAi00044010Inferred_automaticallyRNAi_primary
WBRNAi00012898Inferred_automaticallyRNAi_primary
WBRNAi00012899Inferred_automaticallyRNAi_primary
WBRNAi00030650Inferred_automaticallyRNAi_primary
Expr_patternExpr11381
Expr1026179
Expr1030238
Expr1147977
Expr2009852
Expr2028092
Drives_constructWBCnstr00016070
WBCnstr00018810
WBCnstr00037554
Construct_productWBCnstr00018810
WBCnstr00037554
Microarray_results (19)
Expression_cluster (183)
Interaction (65)
WBProcessWBbiopr:00000014
WBbiopr:00000015
Map_infoMapXPosition-0.106284Error0.004973
Well_ordered
PositivePositive_cloneF08F1Inferred_automaticallyFrom sequence, transcript, pseudogene data
Mapping_dataMulti_point1571
1738
1739
1740
1741
1742
2211
4088
4755
Pos_neg_data4982
4983
4984
Reference (50)
RemarkSequence connection from [Stanfield GM]
MethodGene