WormBase Tree Display for Gene: WBGene00000647
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WBGene00000647 | Evidence | Person_evidence | WBPerson345 | ||||
---|---|---|---|---|---|---|---|
WBPerson651 | |||||||
SMap | S_parent | Sequence | Y49F6B | ||||
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | col | ||||||
Allele (107) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00094909 | ||||||
00094910 | |||||||
00094911 | |||||||
00094912 | |||||||
00094913 | |||||||
00094914 | |||||||
00107645 | |||||||
Ortholog (29) | |||||||
Paralog (163) | |||||||
Structured_description | Automated_description | Predicted to be a structural constituent of cuticle. Involved in collagen and cuticulin-based cuticle development. Predicted to be located in membrane and nucleus. Expressed in hyp7 syncytium and seam cell. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | Y49F6B.10 | |||||
Corresponding_transcript | Y49F6B.10.1 | ||||||
Other_sequence | DV019696.1 | ||||||
EG025793.1 | |||||||
CJC05350_1 | |||||||
CSC01977_1 | |||||||
CBC00435_1 | |||||||
X89450.1 | |||||||
FD516848.1 | |||||||
Associated_feature | WBsf649971 | ||||||
WBsf981180 | |||||||
WBsf987267 | |||||||
WBsf222865 | |||||||
WBsf222866 | |||||||
Experimental_info | RNAi_result | WBRNAi00076804 | Inferred_automatically | RNAi_primary | |||
WBRNAi00007502 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00057035 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00095082 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00037305 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00020800 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr11721 | ||||||
Expr11731 | |||||||
Expr1017086 | |||||||
Expr1030380 | |||||||
Expr1160476 | |||||||
Expr2010418 | |||||||
Expr2028659 | |||||||
Drives_construct | WBCnstr00019342 | ||||||
Microarray_results (19) | |||||||
Expression_cluster (257) | |||||||
Interaction (26) | |||||||
Map_info | Map | II | Position | -6.25066 | Error | 0.000647 | |
Positive | Positive_clone | Y49F6B | Inferred_automatically | From CDS info | |||
From sequence, transcript, pseudogene data | |||||||
Pseudo_map_position | |||||||
Reference | WBPaper00038491 | ||||||
WBPaper00043837 | |||||||
WBPaper00044857 | |||||||
WBPaper00055090 | |||||||
WBPaper00059205 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |