WormBase Tree Display for Gene: WBGene00000657

WBGene00000657 Evidence: Person_evidence: WBPerson345
      WBPerson651
  SMap: S_parent: Sequence: F38A3
  Identity: Version: 1
    Name: CGC_name: col-81 Person_evidence: WBPerson345
      Sequence_name: F38A3.1
      Molecular_name: F38A3.1
        F38A3.1.1
        CE02213
      Other_name: CELE_F38A3.1 Accession_evidence: NDB BX284602
      Public_name: col-81
    DB_info: Database: AceView gene 2L302
        WormQTL gene WBGene00000657
        WormFlux gene WBGene00000657
        NDB locus_tag CELE_F38A3.1
        Panther gene CAEEL|WormBase=WBGene00000657|UniProtKB=Q20135
          family PTHR24637
        NCBI gene 174686
        RefSeq protein NM_063960.5
        TrEMBL UniProtAcc Q20135
        UniProt_GCRP UniProtAcc Q20135
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:21 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: col
    Allele (17)
    Strain: WBStrain00050967
    RNASeq_FPKM (74)
    GO_annotation: 00067282
      00067283
      00067284
      00107653
    Ortholog (27)
    Paralog (163)
    Structured_description: Automated_description: Predicted to be a structural constituent of cuticle. Predicted to be located in membrane. Predicted to be part of collagen trimer. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F38A3.1
    Corresponding_transcript: F38A3.1.1
    Other_sequence (29)
    Associated_feature: WBsf989576
      WBsf1013144
      WBsf223866
  Experimental_info: RNAi_result: WBRNAi00014521 Inferred_automatically: RNAi_primary
      WBRNAi00046666 Inferred_automatically: RNAi_primary
      WBRNAi00031937 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1027859
      Expr1030387
      Expr1150539
      Expr2010428
      Expr2028668
    Drives_construct: WBCnstr00037393
    Construct_product: WBCnstr00037393
    Microarray_results (18)
    Expression_cluster (294)
    Interaction: WBInteraction000101029
      WBInteraction000101662
      WBInteraction000102809
      WBInteraction000103310
      WBInteraction000105772
      WBInteraction000106090
      WBInteraction000108886
      WBInteraction000109903
      WBInteraction000110639
      WBInteraction000112247
      WBInteraction000112716
      WBInteraction000113021
      WBInteraction000115118
      WBInteraction000115152
      WBInteraction000115375
      WBInteraction000115383
      WBInteraction000118354
      WBInteraction000118416
      WBInteraction000122313
      WBInteraction000124016
      WBInteraction000135196
      WBInteraction000142182
      WBInteraction000142341
      WBInteraction000142700
      WBInteraction000142827
      WBInteraction000143698
      WBInteraction000143699
      WBInteraction000143800
      WBInteraction000146135
      WBInteraction000150428
      WBInteraction000150465
      WBInteraction000150524
      WBInteraction000152530
      WBInteraction000153111
      WBInteraction000160014
      WBInteraction000165339
      WBInteraction000168290
      WBInteraction000169001
      WBInteraction000172526
      WBInteraction000174577
      WBInteraction000181383
      WBInteraction000183769
      WBInteraction000184928
      WBInteraction000186036
      WBInteraction000186958
      WBInteraction000189337
      WBInteraction000191172
      WBInteraction000193477
      WBInteraction000194341
      WBInteraction000195624
      WBInteraction000196694
      WBInteraction000197948
      WBInteraction000198603
      WBInteraction000199558
      WBInteraction000200046
      WBInteraction000202101
      WBInteraction000204691
      WBInteraction000206760
      WBInteraction000213707
      WBInteraction000214778
      WBInteraction000216475
      WBInteraction000216708
      WBInteraction000216712
      WBInteraction000217659
      WBInteraction000217897
      WBInteraction000222697
      WBInteraction000222852
      WBInteraction000222901
      WBInteraction000227676
      WBInteraction000227728
      WBInteraction000228999
      WBInteraction000229138
      WBInteraction000230346
      WBInteraction000230796
      WBInteraction000235019
      WBInteraction000236437
      WBInteraction000236880
      WBInteraction000237885
      WBInteraction000237983
      WBInteraction000240027
      WBInteraction000241028
      WBInteraction000241641
      WBInteraction000242585
      WBInteraction000243332
      WBInteraction000245092
      WBInteraction000246238
      WBInteraction000246745
      WBInteraction000251093
      WBInteraction000252212
      WBInteraction000252703
      WBInteraction000253971
      WBInteraction000254693
      WBInteraction000257126
      WBInteraction000261821
      WBInteraction000262765
      WBInteraction000265124
      WBInteraction000266791
      WBInteraction000267755
      WBInteraction000268373
      WBInteraction000268644
      WBInteraction000269901
      WBInteraction000273638
      WBInteraction000275154
      WBInteraction000277872
      WBInteraction000278481
      WBInteraction000280916
      WBInteraction000283785
      WBInteraction000285134
      WBInteraction000291838
      WBInteraction000292092
      WBInteraction000292533
      WBInteraction000292943
      WBInteraction000292961
      WBInteraction000294018
      WBInteraction000296380
      WBInteraction000299093
      WBInteraction000299817
      WBInteraction000307820
      WBInteraction000311853
      WBInteraction000321621
      WBInteraction000323267
      WBInteraction000324555
      WBInteraction000324866
      WBInteraction000325077
      WBInteraction000326656
      WBInteraction000327276
      WBInteraction000328062
      WBInteraction000330445
      WBInteraction000330743
      WBInteraction000335589
      WBInteraction000336270
      WBInteraction000337719
      WBInteraction000341502
      WBInteraction000344499
      WBInteraction000346821
      WBInteraction000348625
      WBInteraction000350618
      WBInteraction000353218
      WBInteraction000360910
      WBInteraction000361091
      WBInteraction000371589
      WBInteraction000374911
      WBInteraction000375502
      WBInteraction000380901
      WBInteraction000382233
      WBInteraction000383213
      WBInteraction000386679
      WBInteraction000394750
      WBInteraction000394970
      WBInteraction000407366
      WBInteraction000412745
      WBInteraction000413850
      WBInteraction000413872
      WBInteraction000414386
      WBInteraction000416126
      WBInteraction000417679
      WBInteraction000423436
      WBInteraction000426405
      WBInteraction000434853
      WBInteraction000439455
      WBInteraction000449272
      WBInteraction000453003
      WBInteraction000468282
      WBInteraction000471933
      WBInteraction000472974
      WBInteraction000550685
      WBInteraction000557798
      WBInteraction000585501
  Map_info: Map: II Position: 3.14124 Error: 0.002429
    Positive: Positive_clone: F38A3 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00055090
    WBPaper00059205
    WBPaper00065859
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene