WormBase Tree Display for Gene: WBGene00000715
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WBGene00000715 | Evidence | Person_evidence | WBPerson345 | ||||||
---|---|---|---|---|---|---|---|---|---|
WBPerson651 | |||||||||
SMap | S_parent | Sequence | T15B7 | ||||||
Identity | Version | 1 | |||||||
Name | CGC_name | col-142 | Person_evidence | WBPerson345 | |||||
Sequence_name | T15B7.4 | ||||||||
Molecular_name | T15B7.4 | ||||||||
T15B7.4.1 | |||||||||
CE13654 | |||||||||
Other_name | CELE_T15B7.4 | Accession_evidence | NDB | BX284605 | |||||
Public_name | col-142 | ||||||||
DB_info | Database | AceView | gene | 5H313 | |||||
WormQTL | gene | WBGene00000715 | |||||||
WormFlux | gene | WBGene00000715 | |||||||
NDB | locus_tag | CELE_T15B7.4 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00000715|UniProtKB=O17036 | |||||||
family | PTHR24637 | ||||||||
NCBI | gene | 188514 | |||||||
RefSeq | protein | NM_072335.8 | |||||||
TREEFAM | TREEFAM_ID | TF316783 | |||||||
TrEMBL | UniProtAcc | O17036 | |||||||
UniProt_GCRP | UniProtAcc | O17036 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:21 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | col | ||||||||
Allele (32) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00029187 | ||||||||
00029188 | |||||||||
00029189 | |||||||||
00107703 | |||||||||
Ortholog (39) | |||||||||
Paralog (170) | |||||||||
Structured_description | Automated_description | Predicted to be a structural constituent of cuticle. Predicted to be located in membrane. Predicted to be part of collagen trimer. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | T15B7.4 | |||||||
Corresponding_transcript | T15B7.4.1 | ||||||||
Other_sequence (28) | |||||||||
Associated_feature | WBsf1000371 | ||||||||
WBsf231914 | |||||||||
Experimental_info | RNAi_result | WBRNAi00035590 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00018741 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00103532 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00053365 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00053366 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1014690 | ||||||||
Expr1030433 | |||||||||
Expr1156947 | |||||||||
Expr2010336 | |||||||||
Expr2028579 | |||||||||
Drives_construct | WBCnstr00037343 | ||||||||
Construct_product | WBCnstr00037343 | ||||||||
Microarray_results (17) | |||||||||
Expression_cluster (332) | |||||||||
Interaction (79) | |||||||||
Map_info | Map | V | Position | 0.310106 | Error | 0.004325 | |||
Positive | Positive_clone | T15B7 | Inferred_automatically | From CDS info | |||||
From sequence, transcript, pseudogene data | |||||||||
Pseudo_map_position | |||||||||
Reference | WBPaper00038491 | ||||||||
WBPaper00055090 | |||||||||
WBPaper00055425 | |||||||||
WBPaper00057602 | |||||||||
WBPaper00059191 | |||||||||
WBPaper00063926 | |||||||||
WBPaper00064676 | |||||||||
WBPaper00064957 | |||||||||
WBPaper00065080 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |