WormBase Tree Display for Gene: WBGene00000736

WBGene00000736 Evidence: Person_evidence: WBPerson345
      WBPerson651
  SMap: S_parent: Sequence: F46B3
  Identity: Version: 1
    Name: CGC_name: col-163 Person_evidence: WBPerson345
      Sequence_name: F46B3.17
      Molecular_name: F46B3.17
        F46B3.17.1
        CE33787
      Other_name: CELE_F46B3.17 Accession_evidence: NDB BX284605
      Public_name: col-163
    DB_info: Database: AceView gene 5V71
        WormQTL gene WBGene00000736
        WormFlux gene WBGene00000736
        NDB locus_tag CELE_F46B3.17
        NCBI gene 3564794
        RefSeq protein NM_001028762.2
        TrEMBL UniProtAcc Q86D09
        UniProt_GCRP UniProtAcc Q86D09
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:21 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: col
    Allele (170)
    RNASeq_FPKM (74)
    GO_annotation: 00083115
    Ortholog (29)
    Paralog (162)
    Structured_description: Automated_description: Predicted to be located in membrane. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F46B3.17
    Corresponding_transcript: F46B3.17.1
    Other_sequence: CJC15861_1
    Associated_feature: WBsf1003593
  Experimental_info: Expr_pattern: Expr1011514
      Expr1151317
      Expr2028601
    Drives_construct: WBCnstr00037322
    Construct_product: WBCnstr00037322
    Microarray_results (13)
    Expression_cluster: WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
      WBPaper00037950:all-neurons_L1-larva_expressed
      WBPaper00037950:AVE-neuron_L1-larva_expressed
      WBPaper00037950:bodywall-muscle_L1-larva_expressed
      WBPaper00037950:bodywall-muscle_L2-larva_expressed
      WBPaper00037950:coelomocytes_L1-larva_expressed
      WBPaper00037950:coelomocytes_L2-larva_expressed
      WBPaper00037950:dopaminergic-neurons_L1-larva_expressed
      WBPaper00037950:germline-precursors_blastula-embryo_expressed
      WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
      WBPaper00037950:hypodermis_L1-larva_expressed
      WBPaper00037950:intestine_L2-larva_expressed
      WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
      WBPaper00038438:D.coniospora_12hr_downregulated_RNAseq
      WBPaper00038438:E.faecalis_24hr_upregulated_RNAseq
      WBPaper00040560:hpl-2_embryo_downregulated
      WBPaper00044316:CH3HgCl_7.5uM_downregulated
      WBPaper00045316:prg-1_upregulated_L4
      WBPaper00045420:fertilization_downregulated_transcript
      WBPaper00049942:hsf-1(RNAi)_upregulated
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050801:DAF-12_dauer_regulome
      WBPaper00050801:DAF-16_dauer_regulome
      WBPaper00050801:DPY-21_dauer_regulome
      WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00052884:emb-4(hc60)_upregulated
      WBPaper00053388:dauer_regulated_Cluster3
      WBPaper00055226:adr-1(tm668)_upregulated
      WBPaper00055354:eat-2(ad1116)_downregulated
      WBPaper00055354:Rapamycin-Rifampicin-Allantoin_downregulated
      WBPaper00055354:Rifampicin-Allantoin_downregulated
      WBPaper00056868:P.aeruginosa_upregulated_smallRNA
      WBPaper00058598:spn-4(tm291)_downregulated
      WBPaper00059253:sucrose_downregulated
      WBPaper00059253:sucrose_stearic-acid_downregulated
      WBPaper00060661:sensory-neuron_enriched
      WBPaper00061341:28C_48h_upregulated
      WBPaper00061527:srj-42-srw-113
      WBPaper00062103:neuron_enriched
      WBPaper00062534:fat-P-80_upregulated
      WBPaper00062585:hlh-26(ok1453)_downregulated_E.faecium
      WBPaper00064088:Day-1-adult_vs_L4_downregulated_fem-3(q20)
      WBPaper00064088:Day-1-adult_vs_L4_downregulated_glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_fem-3(q20)
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_glp-1(e2141)
      WBPaper00064494:postdauer_downregulated_WholeAnimal
      WBPaper00065841:20_0
      WBPaper00065841:46_0
      WBPaper00065841:55_0
      WBPaper00036130:mir-243_up_regulated
    Interaction: WBInteraction000467619
      WBInteraction000470826
      WBInteraction000471450
      WBInteraction000473167
      WBInteraction000473431
      WBInteraction000546731
      WBInteraction000567197
  Map_info: Map: V Position: 25.0165 Error: 0.000875
    Positive: Positive_clone: F46B3 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene