WormBase Tree Display for Gene: WBGene00000754

WBGene00000754 Evidence: Person_evidence: WBPerson345
      WBPerson651
  SMap: S_parent: Sequence: W03G11
  Identity: Version: 1
    Name: CGC_name: col-181 Person_evidence: WBPerson345
      Sequence_name: W03G11.1
      Molecular_name: W03G11.1a
        W03G11.1a.1
        CE26826
        W03G11.1b
        CE03781
        W03G11.1b.1
      Other_name: CELE_W03G11.1 Accession_evidence: NDB BX284606
      Public_name: col-181
    DB_info: Database: WormQTL gene WBGene00000754
        WormFlux gene WBGene00000754
        NDB locus_tag CELE_W03G11.1
        Panther gene CAEEL|WormBase=WBGene00000754|UniProtKB=Q23150
          family PTHR24637
        NCBI gene 181378
        RefSeq protein NM_001047830.5
            NM_001047831.4
        TrEMBL UniProtAcc Q2XN04
            Q23150
        UniProt_GCRP UniProtAcc Q23150
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:21 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: col
    Allele (29)
    RNASeq_FPKM (74)
    GO_annotation: 00077444
      00077445
      00077446
      00107740
    Ortholog (33)
    Paralog (163)
    Structured_description: Concise_description: col-181 is homologous to the human gene PRO ALPHA 1(I) COLLAGEN (COL1A1; OMIM:120150), which when mutated leads to osteogenesis imperfecta. Curator_confirmed: WBPerson1823
            WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Predicted to be a structural constituent of cuticle. Predicted to be located in membrane. Predicted to be part of collagen trimer. Human ortholog(s) of this gene implicated in pulmonary tuberculosis. Is an ortholog of human COL5A3 (collagen type V alpha 3 chain) and MARCO (macrophage receptor with collagenous structure). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:2957 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:6895)
  Molecular_info: Corresponding_CDS: W03G11.1a
      W03G11.1b
    Corresponding_CDS_history: W03G11.1:wp42
    Corresponding_transcript: W03G11.1a.1
      W03G11.1b.1
    Other_sequence (11)
    Associated_feature: WBsf648586
      WBsf648587
      WBsf1007212
      WBsf1023989
      WBsf236452
  Experimental_info: RNAi_result: WBRNAi00036249 Inferred_automatically: RNAi_primary
      WBRNAi00019577 Inferred_automatically: RNAi_primary
      WBRNAi00054721 Inferred_automatically: RNAi_primary
      WBRNAi00007451 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1010761
      Expr1030461
      Expr1158258
      Expr2010376
      Expr2028618
    Drives_construct: WBCnstr00037304
    Construct_product: WBCnstr00037304
    Microarray_results (24)
    Expression_cluster (260)
    Interaction: WBInteraction000030173
      WBInteraction000030174
      WBInteraction000030175
      WBInteraction000101510
      WBInteraction000102722
      WBInteraction000109506
      WBInteraction000114450
      WBInteraction000118067
      WBInteraction000119630
      WBInteraction000124016
      WBInteraction000125244
      WBInteraction000135282
      WBInteraction000135344
      WBInteraction000138192
      WBInteraction000140821
      WBInteraction000141852
      WBInteraction000146293
      WBInteraction000147517
      WBInteraction000149677
      WBInteraction000150004
      WBInteraction000152112
      WBInteraction000161736
      WBInteraction000161923
      WBInteraction000162002
      WBInteraction000162717
      WBInteraction000164675
      WBInteraction000168643
      WBInteraction000170922
      WBInteraction000175006
      WBInteraction000177434
      WBInteraction000177451
      WBInteraction000179083
      WBInteraction000180766
      WBInteraction000181716
      WBInteraction000181733
      WBInteraction000182160
      WBInteraction000183040
      WBInteraction000183419
      WBInteraction000183773
      WBInteraction000185923
      WBInteraction000186397
      WBInteraction000186756
      WBInteraction000187458
      WBInteraction000187947
      WBInteraction000188241
      WBInteraction000189788
      WBInteraction000193852
      WBInteraction000194514
      WBInteraction000197305
      WBInteraction000198120
      WBInteraction000199551
      WBInteraction000200304
      WBInteraction000201184
      WBInteraction000202591
      WBInteraction000205070
      WBInteraction000209036
      WBInteraction000210117
      WBInteraction000210654
      WBInteraction000212648
      WBInteraction000212937
      WBInteraction000214374
      WBInteraction000216998
      WBInteraction000217471
      WBInteraction000218959
      WBInteraction000219258
      WBInteraction000220862
      WBInteraction000223109
      WBInteraction000223926
      WBInteraction000223948
      WBInteraction000224451
      WBInteraction000227319
      WBInteraction000230239
      WBInteraction000230527
      WBInteraction000233670
      WBInteraction000236899
      WBInteraction000237153
      WBInteraction000238780
      WBInteraction000240900
      WBInteraction000241939
      WBInteraction000244123
      WBInteraction000244213
      WBInteraction000245008
      WBInteraction000247468
      WBInteraction000251056
      WBInteraction000252138
      WBInteraction000253487
      WBInteraction000253741
      WBInteraction000254106
      WBInteraction000255548
      WBInteraction000256705
      WBInteraction000257379
      WBInteraction000258070
      WBInteraction000260284
      WBInteraction000260605
      WBInteraction000265678
      WBInteraction000267059
      WBInteraction000267616
      WBInteraction000271938
      WBInteraction000272143
      WBInteraction000272701
      WBInteraction000272733
      WBInteraction000273005
      WBInteraction000273443
      WBInteraction000273853
      WBInteraction000275543
      WBInteraction000285334
      WBInteraction000285686
      WBInteraction000292107
      WBInteraction000292793
      WBInteraction000297753
      WBInteraction000299702
      WBInteraction000300347
      WBInteraction000304597
      WBInteraction000308623
      WBInteraction000312761
      WBInteraction000315851
      WBInteraction000316970
      WBInteraction000322205
      WBInteraction000322289
      WBInteraction000322503
      WBInteraction000324040
      WBInteraction000327789
      WBInteraction000332585
      WBInteraction000336815
      WBInteraction000337119
      WBInteraction000338147
      WBInteraction000341769
      WBInteraction000343223
      WBInteraction000354464
      WBInteraction000357659
      WBInteraction000363704
      WBInteraction000364332
      WBInteraction000364884
      WBInteraction000368073
      WBInteraction000368329
      WBInteraction000375877
      WBInteraction000376654
      WBInteraction000379769
      WBInteraction000385616
      WBInteraction000387518
      WBInteraction000392790
      WBInteraction000395277
      WBInteraction000406648
      WBInteraction000408747
      WBInteraction000409732
      WBInteraction000414080
      WBInteraction000414458
      WBInteraction000416645
      WBInteraction000421737
      WBInteraction000426941
      WBInteraction000428075
      WBInteraction000429557
      WBInteraction000430253
      WBInteraction000431399
      WBInteraction000431554
      WBInteraction000433220
      WBInteraction000433310
      WBInteraction000433732
      WBInteraction000435082
      WBInteraction000441996
      WBInteraction000447556
      WBInteraction000447557
      WBInteraction000450992
      WBInteraction000451040
      WBInteraction000455261
      WBInteraction000460551
      WBInteraction000462903
      WBInteraction000472257
      WBInteraction000474302
      WBInteraction000474946
      WBInteraction000579917
  Map_info: Map: X Position: 7.0052
    Positive: Positive_clone: W03G11 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00032322
    WBPaper00038491
    WBPaper00055090
    WBPaper00065331
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene