WormBase Tree Display for Gene: WBGene00000775
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| WBGene00000775 | Evidence | Person_evidence | WBPerson567 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | F38E11 | ||||||
| Identity | Version | 2 | |||||||
| Name | CGC_name | cpin-1 | Person_evidence | WBPerson531 | |||||
| Sequence_name | F38E11.3 | ||||||||
| Molecular_name | F38E11.3 | ||||||||
| F38E11.3.1 | |||||||||
| CE26624 | |||||||||
| F38E11.3.2 | |||||||||
| Other_name | cpi-1 | Paper_evidence | WBPaper00004983 | ||||||
| Person_evidence | WBPerson531 | ||||||||
| CELE_F38E11.3 | Accession_evidence | NDB | BX284604 | ||||||
| Public_name | cpin-1 | ||||||||
| DB_info | Database | AceView | gene | 4K215 | |||||
| WormQTL | gene | WBGene00000775 | |||||||
| WormFlux | gene | WBGene00000775 | |||||||
| NDB | locus_tag | CELE_F38E11.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00000775|UniProtKB=Q20166 | |||||||
| family | PTHR43608 | ||||||||
| NCBI | gene | 185473 | |||||||
| RefSeq | protein | NM_069268.4 | |||||||
| TREEFAM | TREEFAM_ID | TF321284 | |||||||
| TrEMBL | UniProtAcc | Q20166 | |||||||
| UniProt_GCRP | UniProtAcc | Q20166 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:21 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| 2 | 04 Jan 2006 10:55:52 | WBPerson2970 | Name_change | CGC_name | cpin-1 | ||||
| Other_name | cpi-1 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | cpin | ||||||||
| Allele (21) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00067378 | ||||||||
| 00067379 | |||||||||
| 00107778 | |||||||||
| 00107779 | |||||||||
| Ortholog (33) | |||||||||
| Structured_description | Concise_description | cpin-1 is orthologous to a mammalian protein variously identified as guanine aminohydrolase (or guanine deaminase, or guanase), cypin, or p51-nedasin. | Paper_evidence | WBPaper00004983 | |||||
| WBPaper00012755 | |||||||||
| WBPaper00012783 | |||||||||
| WBPaper00012786 | |||||||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 16 Jul 2007 00:00:00 | ||||||||
| Automated_description | Predicted to enable deaminase activity. Predicted to be located in cytosol. Human ortholog(s) of this gene implicated in stomach cancer. Is an ortholog of human GDA (guanine deaminase). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:10534 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:4212) | ||||
| Molecular_info | Corresponding_CDS | F38E11.3 | |||||||
| Corresponding_CDS_history | F38E11.3:wp34 | ||||||||
| Corresponding_transcript | F38E11.3.1 | ||||||||
| F38E11.3.2 | |||||||||
| Other_sequence (27) | |||||||||
| Associated_feature | WBsf655042 | ||||||||
| WBsf655043 | |||||||||
| WBsf228830 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00031966 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00046718 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00014569 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00080889 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr3710 | ||||||||
| Expr1014692 | |||||||||
| Expr1030479 | |||||||||
| Expr1150598 | |||||||||
| Expr2010491 | |||||||||
| Expr2028731 | |||||||||
| Drives_construct | WBCnstr00037286 | ||||||||
| Construct_product | WBCnstr00037286 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (136) | |||||||||
| Interaction (21) | |||||||||
| Map_info | Map | IV | Position | 4.26391 | Error | 0.00165 | |||
| Positive | Positive_clone | F38E11 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00012786 | ||||||||
| WBPaper00018122 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00039111 | |||||||||
| WBPaper00044126 | |||||||||
| WBPaper00047343 | |||||||||
| WBPaper00048615 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00065140 | |||||||||
| Remark | WBGene00000775 has been renamed from cpi-1 to cpin-1 | Person_evidence | WBPerson531 | ||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
