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WormBase Tree Display for Gene: WBGene00000830

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Name Class

WBGene00000830SMapS_parentSequenceY54G11A
IdentityVersion1
NameCGC_namectl-1Person_evidenceWBPerson95
Sequence_nameY54G11A.6
Molecular_nameY54G11A.6
Y54G11A.6.1
CE30713
Other_namecat2Accession_evidenceEMBLY14065
Y14066
CELE_Y54G11A.6Accession_evidenceNDBBX284602
Public_namectl-1
DB_infoDatabase (13)
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:21WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classctl
Allele (26)
StrainWBStrain00031898
RNASeq_FPKM (74)
GO_annotation (20)
OrthologWBGene00057582Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00039723Caenorhabditis briggsaeFrom_analysisOrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00039724Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00157519Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00150090Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00108140Pristionchus pacificusFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00155542Caenorhabditis brenneriFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00126358Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00079537Caenorhabditis remaneiFrom_analysisTreeFam
CBOVI.g6573Caenorhabditis bovisFrom_analysisWormBase-Compara
CBOVI.g6575Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g10831Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP21.g10832Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g5133Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g1496Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g17290Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g27289Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g8986Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g3104Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g18437Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g21656Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g22601Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g5605Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00105.g4458Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00133.g5265Caenorhabditis angariaFrom_analysisWormBase-Compara
Cnig_chr_II.g6715Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold586.g4883Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00020.g1219Caenorhabditis sinicaFrom_analysisWormBase-Compara
GCK72_005802Caenorhabditis remaneiFrom_analysisWormBase-Compara
Pan_g13459Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_20072810Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrII_pilon.g6514Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00092826Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00263203Strongyloides rattiFrom_analysisWormBase-Compara
SGD:S000002664Saccharomyces cerevisiaeFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
SGD:S000003320Saccharomyces cerevisiaeFrom_analysisEnsEMBL-Compara
Hieranoid
OMA
OrthoFinder
Panther
PhylomeDB
FB:FBgn0032061Drosophila melanogasterFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoInspector
Panther
PhylomeDB
SonicParanoid
FB:FBgn0000261Drosophila melanogasterFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoInspector
Panther
PhylomeDB
SonicParanoid
ZFIN:ZDB-GENE-000210-20Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
HGNC:1516Homo sapiensFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
MGI:88271Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
RGD:2279Rattus norvegicusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
ParalogWBGene00000831Caenorhabditis elegansFrom_analysisInparanoid_8
Panther
WormBase-Compara
WBGene00013220Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
Structured_descriptionConcise_descriptionctl-1 encodes one of three C. elegans catalases; CTL-1 exhibits catalase activity in vitro, and thus likely functions in vivo as an antioxidant enzyme that protects cells from reactive oxygen species; ctl-1 activity contributes to the extended lifespan seen in daf-2 mutant animals; in addition, ctl-1 expression is negatively regulated by DAF-2-mediated insulin signaling; as CTL-1 does not possess a C-terminal peroxisomal targeting signal (PTS), it is predicted to be a cytosolic catalase.Paper_evidenceWBPaper00003973
WBPaper00005976
WBPaper00006515
Curator_confirmedWBPerson48
WBPerson1843
Date_last_updated23 May 2006 00:00:00
Automated_descriptionEnables catalase activity. Predicted to be involved in hydrogen peroxide catabolic process and response to hydrogen peroxide. Predicted to be located in mitochondrion and peroxisome. Human ortholog(s) of this gene implicated in several diseases, including autoimmune disease (multiple); eye disease (multiple); and lung disease (multiple). Is an ortholog of human CAT (catalase).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoPotential_model (48)
Molecular_infoCorresponding_CDSY54G11A.6
Corresponding_CDS_historyY54G11A.6:wp78
Corresponding_transcriptY54G11A.6.1
Other_sequence (60)
Associated_featureWBsf019139
WBsf019140
WBsf019141
WBsf224261
Experimental_infoRNAi_resultWBRNAi00063177Inferred_automaticallyRNAi_primary
WBRNAi00078268Inferred_automaticallyRNAi_primary
WBRNAi00103092Inferred_automaticallyRNAi_primary
WBRNAi00030271Inferred_automaticallyRNAi_primary
WBRNAi00112317Inferred_automaticallyRNAi_primary
WBRNAi00063176Inferred_automaticallyRNAi_primary
WBRNAi00063178Inferred_automaticallyRNAi_primary
WBRNAi00020988Inferred_automaticallyRNAi_primary
WBRNAi00057425Inferred_automaticallyRNAi_primary
Expr_patternExpr1318
Expr1320
Expr1030512
Expr1160867
Expr2010575
Expr2028815
Drives_constructWBCnstr00005460
WBCnstr00037260
Construct_productWBCnstr00005460
WBCnstr00010215
WBCnstr00037260
Microarray_results (25)
Expression_cluster (185)
Interaction (161)
WBProcessWBbiopr:00000039
WBbiopr:00000096
WBbiopr:00000121
Map_infoMapIIPosition22.9037Error0.000659
PositivePositive_cloneY54G11AInferred_automaticallyFrom CDS info
From sequence, transcript, pseudogene data
Mapping_dataMulti_point4241
4938
Pseudo_map_position
Reference (82)
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene