WormBase Tree Display for Gene: WBGene00001033
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WBGene00001033 | SMap | S_parent | Sequence | K08D10 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | CGC_name | dnj-15 | Person_evidence | WBPerson625 | |||||
Sequence_name | K08D10.2 | ||||||||
Molecular_name | K08D10.2a | ||||||||
K08D10.2a.1 | |||||||||
CE44187 | |||||||||
K08D10.2b | |||||||||
CE49045 | |||||||||
K08D10.2b.1 | |||||||||
Other_name | CELE_K08D10.2 | Accession_evidence | NDB | BX284604 | |||||
Public_name | dnj-15 | ||||||||
DB_info | Database | AceView | gene | 4E941 | |||||
WormQTL | gene | WBGene00001033 | |||||||
WormFlux | gene | WBGene00001033 | |||||||
NDB | locus_tag | CELE_K08D10.2 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00001033|UniProtKB=Q21324 | |||||||
family | PTHR14021 | ||||||||
NCBI | gene | 187149 | |||||||
RefSeq | protein | NM_001307635.3 | |||||||
NM_068105.3 | |||||||||
TrEMBL | UniProtAcc | U4PF47 | |||||||
Q21324 | |||||||||
UniProt_GCRP | UniProtAcc | Q21324 | |||||||
OMIM | gene | 608142 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:22 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | dnj | ||||||||
Allele (44) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00071296 | ||||||||
00071297 | |||||||||
00108137 | |||||||||
00108138 | |||||||||
00108139 | |||||||||
00108140 | |||||||||
Contained_in_operon | CEOP4116 | ||||||||
Ortholog (30) | |||||||||
Structured_description | Concise_description | This gene encodes a protein containing a DnaJ ('J') domain. | Paper_evidence | WBPaper00012768 | |||||
WBPaper00012859 | |||||||||
Curator_confirmed | WBPerson567 | ||||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
Automated_description | Predicted to enable ATPase activator activity and protein-folding chaperone binding activity. Predicted to be involved in [2Fe-2S] cluster assembly. Predicted to be located in mitochondrion. Human ortholog(s) of this gene implicated in sideroblastic anemia. Is an ortholog of human HSCB (HscB mitochondrial iron-sulfur cluster cochaperone). | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Disease_info | Potential_model | DOID:8955 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:28913) | ||||
Molecular_info | Corresponding_CDS | K08D10.2a | |||||||
K08D10.2b | |||||||||
Corresponding_CDS_history | K08D10.2:wp208 | ||||||||
Corresponding_transcript | K08D10.2a.1 | ||||||||
K08D10.2b.1 | |||||||||
Other_sequence | NBC00178_1 | ||||||||
Acan_isotig11252 | |||||||||
NB07871 | |||||||||
Associated_feature | WBsf660074 | ||||||||
WBsf996198 | |||||||||
Experimental_info | RNAi_result | WBRNAi00016785 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00064111 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00034118 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00050252 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00076558 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00106330 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1028779 | ||||||||
Expr1030645 | |||||||||
Expr1153950 | |||||||||
Expr2010989 | |||||||||
Expr2029227 | |||||||||
Drives_construct | WBCnstr00037130 | ||||||||
Construct_product | WBCnstr00037130 | ||||||||
Microarray_results (21) | |||||||||
Expression_cluster (88) | |||||||||
Interaction (49) | |||||||||
Map_info | Map | IV | Position | -0.265225 | Error | 0.020199 | |||
Positive | Positive_clone | K08D10 | Inferred_automatically | From CDS info | |||||
From sequence, transcript, pseudogene data | |||||||||
Pseudo_map_position | |||||||||
Reference | WBPaper00005736 | ||||||||
WBPaper00036249 | |||||||||
WBPaper00038491 | |||||||||
WBPaper00055090 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |