WormBase Tree Display for Gene: WBGene00001038
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| WBGene00001038 | SMap | S_parent | Sequence | T15H9 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | dnj-20 | Person_evidence | WBPerson625 | |||||
| Sequence_name | T15H9.7 | ||||||||
| Molecular_name | T15H9.7a | ||||||||
| T15H9.7a.1 | |||||||||
| CE01664 | |||||||||
| T15H9.7b | |||||||||
| CE30689 | |||||||||
| T15H9.7b.1 | |||||||||
| Other_name | CELE_T15H9.7 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | dnj-20 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:22 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| 2 | 08 Jul 2011 16:06:42 | WBPerson2970 | Event | Acquires_merge | WBGene00011787 | ||||
| Acquires_merge | WBGene00011787 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | dnj | ||||||||
| Allele (131) | |||||||||
| Strain | WBStrain00003053 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00084445 | ||||||||
| 00084446 | |||||||||
| 00084447 | |||||||||
| 00084448 | |||||||||
| 00108147 | |||||||||
| 00108148 | |||||||||
| Ortholog (37) | |||||||||
| Paralog | WBGene00001019 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| WBGene00001022 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00001031 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00001034 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00001040 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00001042 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00001044 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable misfolded protein binding activity and unfolded protein binding activity. Predicted to be involved in protein maturation. Predicted to be located in endoplasmic reticulum. Human ortholog(s) of this gene implicated in polycystic kidney disease. Is an ortholog of human DNAJB11 (DnaJ heat shock protein family (Hsp40) member B11). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0080322 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:14889) | ||||
| Molecular_info | Corresponding_CDS | T15H9.7a | |||||||
| T15H9.7b | |||||||||
| Corresponding_CDS_history | T15H9.7:wp191 | ||||||||
| Corresponding_transcript | T15H9.7a.1 | ||||||||
| T15H9.7b.1 | |||||||||
| Other_sequence (56) | |||||||||
| Associated_feature (26) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00106335 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00018745 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00053392 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00053387 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00053386 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram1874 | ||||||||
| Expr6699 | |||||||||
| Expr1022434 | |||||||||
| Expr1030650 | |||||||||
| Expr1156969 | |||||||||
| Expr2010995 | |||||||||
| Expr2029233 | |||||||||
| Drives_construct | WBCnstr00003550 | ||||||||
| WBCnstr00030387 | |||||||||
| Construct_product | WBCnstr00030387 | ||||||||
| Microarray_results (31) | |||||||||
| Expression_cluster (114) | |||||||||
| Interaction (30) | |||||||||
| Map_info | Map | II | Position | 1.61966 | Error | 0.000861 | |||
| Positive | Positive_clone | T15H9 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00027024 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00041771 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Sequence connection changed from T15H9.1 to T15H9.7 as T15H9.1 matches the dnaJ C-terminus domain in PFAM rather than the dnaJ domain. It may still be that both genes need to be merged into one which is suggested by protein evidence from other organisms. However, T15H9.1 has SL1 splice-leader sequences suggesting that this is a valid transcript [krb 030214]. | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
