WormBase Tree Display for Gene: WBGene00001193
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| WBGene00001193 | SMap | S_parent | Sequence | C23H3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | egl-26 | Person_evidence | WBPerson268 | |||||
| Sequence_name | C23H3.1 | ||||||||
| Molecular_name | C23H3.1a | ||||||||
| C23H3.1a.1 | |||||||||
| CE08320 | |||||||||
| C23H3.1b | |||||||||
| CE50533 | |||||||||
| C23H3.1b.1 | |||||||||
| Other_name | egl-48 | ||||||||
| cog-4 | |||||||||
| CELE_C23H3.1 | Accession_evidence | NDB | BX284602 | ||||||
| Public_name | egl-26 | ||||||||
| DB_info | Database | AceView | gene | 2A377 | |||||
| WormQTL | gene | WBGene00001193 | |||||||
| WormFlux | gene | WBGene00001193 | |||||||
| NDB | locus_tag | CELE_C23H3.1 | |||||||
| Panther | gene | CAEEL|EnsemblGenome=WBGene00001193|UniProtKB=P91082 | |||||||
| family | PTHR36948 | ||||||||
| NCBI | gene | 173392 | |||||||
| RefSeq | protein | NM_001313583.2 | |||||||
| NM_061251.6 | |||||||||
| SwissProt | UniProtAcc | P91082 | |||||||
| UniProt_GCRP | UniProtAcc | P91082 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:23 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | egl | ||||||||
| Reference_allele | WBVar00089528 | ||||||||
| Allele (31) | |||||||||
| Legacy_information | n481 : variable bloating Type A many animals form bag-of-worms (60%); abnormal vulva. ES2 adult. NA1. | ||||||||
| See also e1952, n481 | |||||||||
| [C.elegansII] n481 : variable bloating, insensitive to serotonin and imipramine; 60% adults form bag-of-worms; abnormal vulva; suppressor of Tra-3. ES2 adult. ME3. OA1: e1952 (pka egl-48, HME1/2, stronger suppressor of Tra-3). [Trent et al. 1983; Hodgkin 1986; CB; MT] | |||||||||
| Strain | WBStrain00026509 | ||||||||
| WBStrain00026781 | |||||||||
| WBStrain00026856 | |||||||||
| WBStrain00004534 | |||||||||
| WBStrain00004636 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (15) | |||||||||
| Ortholog (27) | |||||||||
| Structured_description | Concise_description | egl-26 encodes a protein that contains an H-box and an NC domain that is a member of the LRAT (lecithin retinol acyltransferase) subfamily of the NlpC/P60 superfamily of enzymes; egl-26 activity is required for fertility, egg laying, and vulval development, specifically the connection of the uterus to the vulva mediated by proper morphogenesis of vulF, the most dorsal vulval cell; EGL-26 is an apical membrane protein that is expressed in many cells, including vulF, and appears to be expressed near the vulva and uterus only during the L4 larval stage; EGL-26 membrane localization is necessary for its function. | Paper_evidence | WBPaper00000635 | |||||
| WBPaper00005103 | |||||||||
| WBPaper00030762 | |||||||||
| Curator_confirmed | WBPerson48 | ||||||||
| WBPerson1843 | |||||||||
| Date_last_updated | 07 Aug 2007 00:00:00 | ||||||||
| Automated_description | Predicted to enable acyltransferase activity. Involved in several processes, including egg-laying behavior; positive regulation of vulval development; and vulval development. Located in cytoplasmic side of apical plasma membrane. Expressed in several structures, including buccal cavity; excretory canal; hermaphrodite gonad; rectum; and vulval cell. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C23H3.1a | |||||||
| C23H3.1b | |||||||||
| Corresponding_transcript | C23H3.1a.1 | ||||||||
| C23H3.1b.1 | |||||||||
| Other_sequence | CR12698 | ||||||||
| CJC02584_1 | |||||||||
| CGC00868_1 | |||||||||
| CRC04517_1 | |||||||||
| Associated_feature | WBsf654854 | ||||||||
| WBsf717611 | |||||||||
| WBsf717612 | |||||||||
| WBsf986311 | |||||||||
| WBsf986312 | |||||||||
| Experimental_info | RNAi_result (12) | ||||||||
| Expr_pattern (11) | |||||||||
| Drives_construct | WBCnstr00000797 | ||||||||
| WBCnstr00006433 | |||||||||
| WBCnstr00010463 | |||||||||
| WBCnstr00011411 | |||||||||
| WBCnstr00019607 | |||||||||
| WBCnstr00022871 | |||||||||
| WBCnstr00037038 | |||||||||
| Construct_product | WBCnstr00006433 | ||||||||
| WBCnstr00010463 | |||||||||
| WBCnstr00037038 | |||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (102) | |||||||||
| Interaction | WBInteraction000000008 | ||||||||
| WBInteraction000030451 | |||||||||
| WBInteraction000157629 | |||||||||
| WBInteraction000165760 | |||||||||
| WBInteraction000193842 | |||||||||
| WBInteraction000214810 | |||||||||
| WBInteraction000239144 | |||||||||
| WBInteraction000245454 | |||||||||
| WBInteraction000247092 | |||||||||
| WBInteraction000247106 | |||||||||
| WBInteraction000250180 | |||||||||
| WBInteraction000262647 | |||||||||
| WBInteraction000272839 | |||||||||
| WBInteraction000279034 | |||||||||
| WBInteraction000282686 | |||||||||
| WBInteraction000285224 | |||||||||
| WBInteraction000287197 | |||||||||
| WBInteraction000288692 | |||||||||
| WBInteraction000289034 | |||||||||
| WBInteraction000294695 | |||||||||
| WBInteraction000305766 | |||||||||
| WBInteraction000306540 | |||||||||
| WBInteraction000310071 | |||||||||
| WBInteraction000311904 | |||||||||
| WBInteraction000316082 | |||||||||
| WBInteraction000318579 | |||||||||
| WBInteraction000328750 | |||||||||
| WBInteraction000342745 | |||||||||
| WBInteraction000351142 | |||||||||
| WBInteraction000352383 | |||||||||
| WBInteraction000358677 | |||||||||
| WBInteraction000358746 | |||||||||
| WBInteraction000368469 | |||||||||
| WBInteraction000371084 | |||||||||
| WBInteraction000386705 | |||||||||
| WBInteraction000389857 | |||||||||
| WBInteraction000390303 | |||||||||
| WBInteraction000390337 | |||||||||
| WBInteraction000391542 | |||||||||
| WBInteraction000395505 | |||||||||
| WBInteraction000399777 | |||||||||
| WBInteraction000407607 | |||||||||
| WBInteraction000417338 | |||||||||
| WBInteraction000419447 | |||||||||
| WBInteraction000424327 | |||||||||
| WBInteraction000424609 | |||||||||
| WBInteraction000425164 | |||||||||
| WBInteraction000425405 | |||||||||
| WBInteraction000433980 | |||||||||
| WBInteraction000438264 | |||||||||
| WBInteraction000438539 | |||||||||
| WBInteraction000447573 | |||||||||
| WBInteraction000448126 | |||||||||
| WBInteraction000450057 | |||||||||
| WBInteraction000456260 | |||||||||
| WBInteraction000502426 | |||||||||
| WBInteraction000502889 | |||||||||
| WBInteraction000503843 | |||||||||
| WBInteraction000505039 | |||||||||
| WBInteraction000519173 | |||||||||
| WBInteraction000523184 | |||||||||
| WBInteraction000523185 | |||||||||
| Map_info | Map | II | Position | -16.2721 | Error | 0.158173 | |||
| Positive | Positive_clone | C23H3 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Mapping_data | 2_point | 797 | |||||||
| 2632 | |||||||||
| 7078 | |||||||||
| 7112 | |||||||||
| Multi_point | 743 | ||||||||
| 1060 | |||||||||
| 1674 | |||||||||
| 3907 | |||||||||
| 4244 | |||||||||
| Pos_neg_data | 4724 | ||||||||
| Reference (25) | |||||||||
| Remark | Sequence connection from [Hanna-Rose W, Han M] | ||||||||
| cog-4 added as an other name. krb 04/03/02 | |||||||||
| Method | Gene |
