WormBase Tree Display for Gene: WBGene00001336
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| WBGene00001336 | SMap | S_parent | Sequence | Y41E3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | qars-1 | Person_evidence | WBPerson36 | |||||
| WBPerson10953 | |||||||||
| Sequence_name | Y41E3.4 | ||||||||
| Molecular_name (12) | |||||||||
| Other_name | qrs-5 | CGC_data_submission | |||||||
| ers-1 | |||||||||
| CELE_Y41E3.4 | Accession_evidence | NDB | BX284604 | ||||||
| Public_name | qars-1 | ||||||||
| DB_info | Database (13) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:24 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| 2 | 29 Jan 2010 14:16:16 | WBPerson2970 | Name_change | CGC_name | qars-1 | ||||
| Other_name | ers-1 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | qars | ||||||||
| Allele (96) | |||||||||
| Strain | WBStrain00052147 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (21) | |||||||||
| Ortholog (42) | |||||||||
| Paralog | WBGene00001337 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| WBGene00001338 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Concise_description | qars-1 encodes a glutaminyl (Q) tRNA synthetase that affects growth and embryonic and larval viability in large-scale RNAi screens; it is predicted to be mitochondrial. | Paper_evidence | WBPaper00004424 | |||||
| WBPaper00005654 | |||||||||
| WBPaper00006395 | |||||||||
| Curator_confirmed | WBPerson48 | ||||||||
| WBPerson1843 | |||||||||
| Date_last_updated | 25 May 2010 00:00:00 | ||||||||
| Automated_description | Predicted to enable glutamine-tRNA ligase activity. Predicted to be involved in glutaminyl-tRNA aminoacylation. Predicted to be located in cytosol. Predicted to be part of aminoacyl-tRNA synthetase multienzyme complex. Is an ortholog of human QARS1 (glutaminyl-tRNA synthetase 1). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y41E3.4a | |||||||
| Y41E3.4b | |||||||||
| Y41E3.4c | |||||||||
| Y41E3.4d | |||||||||
| Corresponding_transcript | Y41E3.4a.1 | ||||||||
| Y41E3.4b.1 | |||||||||
| Y41E3.4c.1 | |||||||||
| Y41E3.4d.1 | |||||||||
| Other_sequence (105) | |||||||||
| Associated_feature | WBsf668542 | ||||||||
| WBsf668543 | |||||||||
| WBsf998666 | |||||||||
| WBsf998667 | |||||||||
| WBsf1018715 | |||||||||
| WBsf1018716 | |||||||||
| WBsf231234 | |||||||||
| WBsf231235 | |||||||||
| WBsf231236 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00026699 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00093120 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00096948 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00009326 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00056412 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00095786 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00078580 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00096887 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00078653 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1015030 | ||||||||
| Expr1030816 | |||||||||
| Expr1159896 | |||||||||
| Expr2015208 | |||||||||
| Expr2033442 | |||||||||
| Microarray_results (26) | |||||||||
| Expression_cluster (125) | |||||||||
| Interaction (195) | |||||||||
| Map_info | Map | IV | Position | 12.8111 | Error | 0.002082 | |||
| Positive | Positive_clone | Y41E3 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00005654 | ||||||||
| WBPaper00006395 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00049828 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00059317 | |||||||||
| WBPaper00061547 | |||||||||
| WBPaper00064934 | |||||||||
| Remark | dl1 : probably cytoplasmic | ||||||||
| ers-1 was an other name of qrs-5 but has been update as ers-1(main name), qrs-5(other-name). ers genes have similarity to both glutamyl tRNA synthetases (ers-) and glutaminyl tRNA synthetases (qrs-). The ers gene class description is thus updated to glutamyl(E)/glutaminyl(Q) aa-tRNA Synthetase | CGC_data_submission | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
