WormBase Tree Display for Gene: WBGene00001566
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WBGene00001566 | Evidence | CGC_data_submission | |||||||
---|---|---|---|---|---|---|---|---|---|
SMap | S_parent | Sequence | C28C12 | ||||||
Identity | Version | 2 | |||||||
Name | CGC_name | acdh-13 | |||||||
Sequence_name | C28C12.9 | ||||||||
Molecular_name | C28C12.9 | ||||||||
C28C12.9.1 | |||||||||
CE28892 | |||||||||
Other_name | gei-9 | Person_evidence | WBPerson1796 | ||||||
CELE_C28C12.9 | Accession_evidence | NDB | BX284604 | ||||||
Public_name | acdh-13 | ||||||||
DB_info | Database | AceView | gene | 4J262 | |||||
WormQTL | gene | WBGene00001566 | |||||||
WormFlux | gene | WBGene00001566 | |||||||
NDB | locus_tag | CELE_C28C12.9 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00001566|UniProtKB=H2KYN3 | |||||||
family | PTHR43884 | ||||||||
NCBI | gene | 177654 | |||||||
RefSeq | protein | NM_069051.7 | |||||||
TrEMBL | UniProtAcc | H2KYN3 | |||||||
UniProt_GCRP | UniProtAcc | H2KYN3 | |||||||
OMIM | gene | 611103 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:24 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
2 | 17 Apr 2008 15:11:23 | WBPerson2970 | Name_change | CGC_name | acdh-13 | ||||
Other_name | gei-9 | ||||||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | acdh | ||||||||
Allele (27) | |||||||||
Strain | WBStrain00032900 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00021753 | ||||||||
00109027 | |||||||||
00109028 | |||||||||
Contained_in_operon | CEOP4292 | ||||||||
Ortholog (38) | |||||||||
Paralog (22) | |||||||||
Structured_description | Concise_description | gei-9 encodes a protein containing a putative acyl-CoA dehydrogenase domain; interacts with GEX-3 in yeast two-hybrid assays. | Paper_evidence | WBPaper00005194 | |||||
Curator_confirmed | WBPerson48 | ||||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
Automated_description | Predicted to enable acyl-CoA dehydrogenase activity. Human ortholog(s) of this gene implicated in nuclear type mitochondrial complex I deficiency 20. Is an ortholog of human ACAD9 (acyl-CoA dehydrogenase family member 9). | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Disease_info | Potential_model | DOID:0112072 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:21497) | ||||
Molecular_info | Corresponding_CDS | C28C12.9 | |||||||
Corresponding_CDS_history | C28C12.9b:wp242 | ||||||||
C28C12.9c:wp242 | |||||||||
Corresponding_transcript | C28C12.9.1 | ||||||||
Other_sequence (19) | |||||||||
Associated_feature | WBsf652001 | ||||||||
WBsf230438 | |||||||||
Experimental_info | RNAi_result | WBRNAi00024662 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00024304 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00071431 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00078651 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00008456 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00103795 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00041406 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1012340 | ||||||||
Expr1030936 | |||||||||
Expr1145436 | |||||||||
Expr2009131 | |||||||||
Expr2027368 | |||||||||
Drives_construct | WBCnstr00037970 | ||||||||
Construct_product | WBCnstr00037970 | ||||||||
Microarray_results (28) | |||||||||
Expression_cluster (113) | |||||||||
Interaction (114) | |||||||||
Map_info | Map | IV | Position | 3.85825 | Error | 0.002492 | |||
Positive | Positive_clone | C28C12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00005194 | ||||||||
WBPaper00042257 | |||||||||
Remark | Sequence connection from [Qadota H, Kaibuchi K] | ||||||||
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
Method | Gene |