WormBase Tree Display for Gene: WBGene00001605
expand all nodes | collapse all nodes | view schema
| WBGene00001605 | Evidence | CGC_data_submission | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | CHROMOSOME_III | |||||||
| Identity | Version | 2 | ||||||||
| Name | CGC_name | gln-4 | ||||||||
| Sequence_name | T25C8.3 | |||||||||
| Molecular_name | T25C8.3 | |||||||||
| Other_name | CELE_T25C8.3 | Accession_evidence | NDB | BX284603 | ||||||
| Public_name | gln-4 | |||||||||
| DB_info | Database | AceView | gene | 3O688 | ||||||
| WormQTL | gene | WBGene00001605 | ||||||||
| NDB | locus_tag | CELE_T25C8.3 | ||||||||
| NCBI | gene | 13191819 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:25 | WBPerson1971 | Event | Imported | Initial conversion from geneace | |||
| 2 | 09 Mar 2005 17:09:58 | WBPerson1983 | Event | Changed_class | CDS | Pseudogene | ||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0000336 | ||||||||
| Gene_class | gln | |||||||||
| Allele | WBVar00876621 | |||||||||
| WBVar00876622 | ||||||||||
| WBVar01794463 | ||||||||||
| WBVar00876623 | ||||||||||
| WBVar01498619 | ||||||||||
| WBVar01499774 | ||||||||||
| WBVar01498679 | ||||||||||
| WBVar00414026 | ||||||||||
| WBVar00414027 | ||||||||||
| WBVar00414028 | ||||||||||
| WBVar00414029 | ||||||||||
| WBVar00414030 | ||||||||||
| WBVar00414031 | ||||||||||
| WBVar00414032 | ||||||||||
| WBVar02036769 | ||||||||||
| WBVar01499629 | ||||||||||
| WBVar01398284 | ||||||||||
| WBVar00182730 | ||||||||||
| WBVar01274313 | ||||||||||
| WBVar01274315 | ||||||||||
| WBVar00876611 | ||||||||||
| WBVar00876612 | ||||||||||
| WBVar00876613 | ||||||||||
| WBVar00876614 | ||||||||||
| WBVar00876615 | ||||||||||
| WBVar00876616 | ||||||||||
| WBVar00876617 | ||||||||||
| WBVar00876618 | ||||||||||
| WBVar00876619 | ||||||||||
| WBVar00876620 | ||||||||||
| RNASeq_FPKM (74) | ||||||||||
| Paralog | WBGene00001603 | Caenorhabditis elegans | From_analysis | modENCODE_Pseudogenes | ||||||
| Structured_description | Automated_description | Enriched in germ line and in male based on proteomic and RNA-seq studies. Is affected by several genes including daf-2; rrf-3; and eat-2 based on RNA-seq and microarray studies. Is affected by thirteen chemicals including methylmercuric chloride; manganese chloride; and stavudine based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS_history | T25C8.3:wp141 | ||||||||
| Corresponding_pseudogene | T25C8.3 | |||||||||
| Other_sequence (71) | ||||||||||
| Experimental_info | Microarray_results | SMD_T25C8.3 | ||||||||
| SMD_Y76A2C.A | ||||||||||
| 189946_at | ||||||||||
| A_12_P134030 | ||||||||||
| Aff_T25C8.3 | ||||||||||
| GPL19516_CGZ0012395 | ||||||||||
| GPL19516_CGZ0036779 | ||||||||||
| GPL21109_Cat_T25C8.3 | ||||||||||
| GPL21109_T25C8.3 | ||||||||||
| GPL3518_CE18965 | ||||||||||
| Expression_cluster (66) | ||||||||||
| Map_info | Map | III | Position | 21.2828 | Error | 0.003537 | ||||
| Positive | Positive_clone | T25C8 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||||
| Pseudo_map_position | ||||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
