WormBase Tree Display for Gene: WBGene00001662
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| WBGene00001662 | Evidence | Accession_evidence | EMBL | AY052771 | |||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | CHROMOSOME_III | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | gop-3 | Person_evidence | WBPerson247 | |||||
| Sequence_name | C34E10.1 | ||||||||
| Molecular_name | C34E10.1 | ||||||||
| C34E10.1.1 | |||||||||
| CE26880 | |||||||||
| Other_name | C34E10.k | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_C34E10.1 | Accession_evidence | NDB | BX284603 | ||||||
| Public_name | gop-3 | ||||||||
| DB_info | Database | AceView | gene | 3G351 | |||||
| WormQTL | gene | WBGene00001662 | |||||||
| WormFlux | gene | WBGene00001662 | |||||||
| NDB | locus_tag | CELE_C34E10.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00001662|UniProtKB=P46576 | |||||||
| family | PTHR12815 | ||||||||
| NCBI | gene | 175723 | |||||||
| RefSeq | protein | NM_065718.8 | |||||||
| SwissProt | UniProtAcc | P46576 | |||||||
| TREEFAM | TREEFAM_ID | TF106126 | |||||||
| UniProt_GCRP | UniProtAcc | P46576 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:25 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | gop | ||||||||
| Allele (40) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00046490 | ||||||||
| 00046491 | |||||||||
| 00046492 | |||||||||
| 00046493 | |||||||||
| 00046494 | |||||||||
| 00046495 | |||||||||
| 00109211 | |||||||||
| Contained_in_operon | CEOP3272 | ||||||||
| Ortholog (39) | |||||||||
| Structured_description (2) | |||||||||
| Disease_info | Potential_model | DOID:0080208 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:24276) | ||||
| Molecular_info | Corresponding_CDS | C34E10.1 | |||||||
| Corresponding_transcript | C34E10.1.1 | ||||||||
| Other_sequence (36) | |||||||||
| Associated_feature | WBsf658923 | ||||||||
| WBsf224895 | |||||||||
| WBsf224896 | |||||||||
| Experimental_info | RNAi_result (22) | ||||||||
| Expr_pattern | Expr1019001 | ||||||||
| Expr1030995 | |||||||||
| Expr1145896 | |||||||||
| Expr2012175 | |||||||||
| Expr2030411 | |||||||||
| Drives_construct | WBCnstr00036793 | ||||||||
| Construct_product | WBCnstr00036793 | ||||||||
| Microarray_results (26) | |||||||||
| Expression_cluster (98) | |||||||||
| Interaction (45) | |||||||||
| Map_info | Map | III | Position | -1.85413 | Error | 0.000487 | |||
| Positive | Positive_clone | C34E10 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00041771 | |||||||||
| WBPaper00047580 | |||||||||
| WBPaper00054664 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00062642 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
