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WormBase Tree Display for Gene: WBGene00001780

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Name Class

WBGene00001780EvidencePerson_evidenceWBPerson1846
SMapS_parentSequenceY53F4B
IdentityVersion1
NameCGC_namegst-32
Sequence_nameY53F4B.37
Molecular_nameY53F4B.37
Y53F4B.37.1
CE32271
Other_nameCELE_Y53F4B.37Accession_evidenceNDBBX284602
Public_namegst-32
DB_infoDatabaseAceViewgene2P462
WormQTLgeneWBGene00001780
WormFluxgeneWBGene00001780
NDBlocus_tagCELE_Y53F4B.37
PanthergeneCAEEL|WormBase=WBGene00001780|UniProtKB=Q9NA96
familyPTHR11571
NCBIgene190230
RefSeqproteinNM_064722.3
TREEFAMTREEFAM_IDTF353041
TrEMBLUniProtAccQ9NA96
UniProt_GCRPUniProtAccQ9NA96
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:25WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classgst
Allele (19)
RNASeq_FPKM (74)
GO_annotation00095866
00095867
Ortholog (46)
Paralog (45)
Structured_descriptionAutomated_descriptionInvolved in response to reactive oxygen species.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSY53F4B.37
Corresponding_CDS_historyY53F4B.37:wp88
Corresponding_transcriptY53F4B.37.1
Other_sequencePPC03858_1
Associated_featureWBsf990921
WBsf1013962
Experimental_infoRNAi_resultWBRNAi00103612Inferred_automaticallyRNAi_primary
WBRNAi00115575Inferred_automaticallyRNAi_primary
WBRNAi00020950Inferred_automaticallyRNAi_primary
WBRNAi00115480Inferred_automaticallyRNAi_primary
Expr_patternExpr1014899
Expr1160729
Expr2012317
Expr2030553
Drives_constructWBCnstr00036691
Construct_productWBCnstr00036691
Microarray_results (15)
Expression_cluster (90)
InteractionWBInteraction000517459
Map_infoMapIIPosition24.3842Error0.009091
PositivePositive_cloneY53F4BInferred_automaticallyFrom CDS info
From sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00038491
WBPaper00042271
WBPaper00055090
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene