WormBase Tree Display for Gene: WBGene00001841
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| WBGene00001841 | Evidence | CGC_data_submission | |||||
|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | C36B7 | ||||
| Identity (6) | |||||||
| Gene_info | Biotype | SO:0001217 | |||||
| Gene_class | hen | ||||||
| Allele (200) | |||||||
| Strain | WBStrain00022193 | ||||||
| RNASeq_FPKM (74) | |||||||
| GO_annotation (11) | |||||||
| Ortholog (11) | |||||||
| Paralog | WBGene00020505 | Caenorhabditis elegans | From_analysis | Panther | |||
| WormBase-Compara | |||||||
| Structured_description | Concise_description | hen-1 encodes a secreted protein that contains a low-density lipoprotein (LDL) receptor motif A; HEN-1 activity is required for integration of sensory stimuli and behavioral plasticity; a hen-1::GFP reporter is expressed in pharyngeal muscles, the vulva, and weakly in a subset of neurons; antibodies to HEN-1 protein detect expression exclusively in the AIY and ASE neurons, where HEN-1 appears to localize to cell bodies and in a punctate pattern in nerve ring axons at sites of synapse formation; HEN-1 expression in AIY appears to be under the control of the TTX-3 LIM domain transcription factor. | Paper_evidence | WBPaper00004727 | |||
| WBPaper00005300 | |||||||
| Curator_confirmed | WBPerson48 | ||||||
| WBPerson1843 | |||||||
| Date_last_updated | 06 Nov 2007 00:00:00 | ||||||
| Automated_description | Predicted to enable transmembrane receptor protein tyrosine kinase activator activity. Involved in dauer larval development and nervous system process. Located in axon and neuronal cell body. Expressed in neurons; pharyngeal muscle cell; and vulva. | Paper_evidence | WBPaper00065943 | ||||
| Curator_confirmed | WBPerson324 | ||||||
| WBPerson37462 | |||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
| Molecular_info | Corresponding_CDS | C36B7.7 | |||||
| Corresponding_transcript | C36B7.7.1 | ||||||
| Experimental_info | RNAi_result | WBRNAi00042048 | Inferred_automatically | RNAi_primary | |||
| WBRNAi00011685 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00029605 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1911 | ||||||
| Expr1912 | |||||||
| Expr4411 | |||||||
| Expr1017068 | |||||||
| Expr1146048 | |||||||
| Expr2012397 | |||||||
| Expr2030633 | |||||||
| Marker48 | |||||||
| Drives_construct | WBCnstr00004840 | ||||||
| WBCnstr00010515 | |||||||
| WBCnstr00011976 | |||||||
| WBCnstr00036653 | |||||||
| Construct_product | WBCnstr00036653 | ||||||
| Antibody | WBAntibody00000523 | ||||||
| Microarray_results (17) | |||||||
| Expression_cluster (165) | |||||||
| Interaction (24) | |||||||
| Anatomy_function | WBbtf0093 | ||||||
| WBbtf0094 | |||||||
| WBbtf0095 | |||||||
| WBbtf0096 | |||||||
| WBbtf0097 | |||||||
| WBbtf0098 | |||||||
| WBbtf0099 | |||||||
| WBbtf0100 | |||||||
| Map_info | Map | X | Position | -1.85356 | Error | 0.009919 | |
| Positive | Positive_clone | C36B7 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
| Mapping_data | Multi_point | 4400 | |||||
| Pseudo_map_position | |||||||
| Reference (47) | |||||||
| Remark | Sequence connection from [Katsura I] | ||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||
| Method | Gene |
