WormBase Tree Display for Gene: WBGene00001901
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WBGene00001901 | SMap | S_parent | Sequence | K06C4 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | CGC_name | his-27 | Person_evidence | WBPerson160 | |||||
Sequence_name | K06C4.13 | ||||||||
Molecular_name | K06C4.13 | ||||||||
K06C4.13.1 | |||||||||
CE03253 | |||||||||
Other_name | CELE_K06C4.13 | Accession_evidence | NDB | BX284605 | |||||
Public_name | his-27 | ||||||||
DB_info | Database | AceView | gene | 5J371 | |||||
WormFlux | gene | WBGene00001901 | |||||||
NDB | locus_tag | CELE_K06C4.13 | |||||||
NCBI | gene | 246024 | |||||||
RefSeq | protein | NM_072891.1 | |||||||
SwissProt | UniProtAcc | P08898 | |||||||
UniProt_GCRP | UniProtAcc | P08898 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:26 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | his | ||||||||
Allele | WBVar01499903 | ||||||||
WBVar01500129 | |||||||||
WBVar01499419 | |||||||||
WBVar01499420 | |||||||||
WBVar01499056 | |||||||||
WBVar01499316 | |||||||||
In_cluster | HIS4_cluster | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00109624 | ||||||||
00109625 | |||||||||
00109626 | |||||||||
00109627 | |||||||||
Ortholog (144) | |||||||||
Paralog (22) | |||||||||
Structured_description | Concise_description | his-27 encodes an H3 histone; by homology, HIS-27 is predicted to function as a nucleosome component required for packaging of DNA into chromatin; his-27 is a replication-dependent histone locus that resides in the HIS4 cluster on chromosome V. | Paper_evidence | WBPaper00005142 | |||||
Curator_confirmed | WBPerson1843 | ||||||||
WBPerson567 | |||||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
Automated_description | Predicted to enable DNA binding activity and protein heterodimerization activity. Predicted to be a structural constituent of chromatin. Predicted to be part of nucleosome. Is an ortholog of several human genes including H3C1 (H3 clustered histone 1); H3C3 (H3 clustered histone 3); and H3C4 (H3 clustered histone 4). | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | K06C4.13 | |||||||
Corresponding_transcript | K06C4.13.1 | ||||||||
Other_sequence | BUC00182_1 | ||||||||
TSC01301_1 | |||||||||
AS07191 | |||||||||
ASC20945_1 | |||||||||
TS03212 | |||||||||
PPC02979_1 | |||||||||
Hbac_isotig01018 | |||||||||
EX012162.1 | |||||||||
Experimental_info | RNAi_result | WBRNAi00090829 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00025512 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00025853 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00081663 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00095670 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00111729 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00047424 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00053027 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1153753 | ||||||||
Drives_construct | WBCnstr00036613 | ||||||||
Construct_product | WBCnstr00036613 | ||||||||
Microarray_results | 172647_x_at | ||||||||
172867_x_at | |||||||||
Expression_cluster (45) | |||||||||
Interaction (179) | |||||||||
Map_info | Map | V | Position | 1.67117 | |||||
Positive | Positive_clone | K06C4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00005142 | ||||||||
WBPaper00005182 | |||||||||
WBPaper00038491 | |||||||||
WBPaper00040135 | |||||||||
WBPaper00055090 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |