WormBase Tree Display for Gene: WBGene00002123
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WBGene00002123 | SMap | S_parent | Sequence | C16E9 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | CGC_name | inx-1 | Person_evidence | WBPerson247 | |||||
Sequence_name | C16E9.4 | ||||||||
Molecular_name (13) | |||||||||
Other_name | opu-1 | ||||||||
pcr55 | Accession_evidence | EMBL | U59212 | ||||||
CELE_C16E9.4 | Accession_evidence | NDB | BX284606 | ||||||
Public_name | inx-1 | ||||||||
DB_info | Database | AceView | gene | XH564 | |||||
WormQTL | gene | WBGene00002123 | |||||||
WormFlux | gene | WBGene00002123 | |||||||
NDB | locus_tag | CELE_C16E9.4 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00002123|UniProtKB=Q17394 | |||||||
family | PTHR11893 | ||||||||
NCBI | gene | 180968 | |||||||
RefSeq | protein | NR_131721.1 | |||||||
NM_171716.5 | |||||||||
NM_001029236.3 | |||||||||
NR_131724.1 | |||||||||
NR_131723.1 | |||||||||
NR_131722.1 | |||||||||
TrEMBL | UniProtAcc | Q17394 | |||||||
Q8IG52 | |||||||||
UniProt_GCRP | UniProtAcc | Q17394 | |||||||
RNAcentral | URSid | URS000078EAF2 | |||||||
URS00007A175D | |||||||||
URS00007ADD04 | |||||||||
URS00007B1CC4 | |||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:26 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | inx | ||||||||
Allele (220) | |||||||||
Strain (2) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (16) | |||||||||
Ortholog (38) | |||||||||
Paralog (24) | |||||||||
Structured_description | Concise_description | inx-1 encodes a predicted member of the innexin family; expressed in 4-6 anterior neurons. | Paper_evidence | WBPaper00005286 | |||||
Curator_confirmed | WBPerson48 | ||||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
Automated_description | Predicted to enable gap junction channel activity. Predicted to be involved in monoatomic ion transmembrane transport. Located in gap junction. Expressed in neurons and pm1. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C16E9.4a | |||||||
C16E9.4b | |||||||||
Corresponding_CDS_history | C16E9.4a:wp86 | ||||||||
C16E9.4b:wp86 | |||||||||
Corresponding_transcript | C16E9.4c | ||||||||
C16E9.4d | |||||||||
C16E9.4e | |||||||||
C16E9.4f | |||||||||
C16E9.4a.1 | |||||||||
C16E9.4a.2 | |||||||||
C16E9.4a.3 | |||||||||
C16E9.4b.1 | |||||||||
C16E9.4b.2 | |||||||||
Other_sequence (42) | |||||||||
Associated_feature (28) | |||||||||
Experimental_info | RNAi_result | WBRNAi00040745 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00010874 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00027682 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00040746 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00040742 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1944 | ||||||||
Expr8669 | |||||||||
Expr11350 | |||||||||
Expr11352 | |||||||||
Expr15819 | |||||||||
Expr1027697 | |||||||||
Expr1031242 | |||||||||
Expr1144787 | |||||||||
Expr2012794 | |||||||||
Expr2031033 | |||||||||
Drives_construct | WBCnstr00010535 | ||||||||
WBCnstr00013435 | |||||||||
WBCnstr00016937 | |||||||||
WBCnstr00018793 | |||||||||
WBCnstr00018949 | |||||||||
WBCnstr00022576 | |||||||||
WBCnstr00036436 | |||||||||
Construct_product | WBCnstr00018795 | ||||||||
WBCnstr00036436 | |||||||||
Antibody | WBAntibody00000517 | ||||||||
Microarray_results (29) | |||||||||
Expression_cluster (183) | |||||||||
Interaction | WBInteraction000039552 | ||||||||
WBInteraction000049176 | |||||||||
WBInteraction000320056 | |||||||||
Map_info | Map | X | Position | -1.9496 | Error | 0.019346 | |||
Positive | Positive_clone | C16E9 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Mapping_data | Multi_point | 4441 | |||||||
4531 | |||||||||
5477 | |||||||||
Pseudo_map_position | |||||||||
Reference (21) | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |